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  1. [ 85%] Built target libshogun
  2. Scanning dependencies of target shogun
  3. Linking CXX shared library libshogun.dylib
  4. Undefined symbols for architecture x86_64:
  5. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::at(unsigned long) const", referenced from:
  6. shogun::COligoStringKernel::encodeOligo(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, unsigned int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::vector<std::__1::pair<int, double>, std::__1::allocator<std::__1::pair<int, double> > >&) in OligoStringKernel.cpp.o
  7. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::find(char, unsigned long) const", referenced from:
  8. shogun::COligoStringKernel::encodeOligo(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, unsigned int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::vector<std::__1::pair<int, double>, std::__1::allocator<std::__1::pair<int, double> > >&) in OligoStringKernel.cpp.o
  9. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  10. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::compare(char const*) const", referenced from:
  11. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  12. shogun::CMultitaskKernelMklNormalizer::init(shogun::CKernel*) in class_list.cpp.o
  13. shogun::CMultitaskKernelMaskPairNormalizer::init(shogun::CKernel*) in class_list.cpp.o
  14. shogun::CMultitaskKernelMaskNormalizer::init(shogun::CKernel*) in class_list.cpp.o
  15. "std::__1::__vector_base_common<true>::__throw_length_error() const", referenced from:
  16. shogun::CMKLMulticlass::getsumofsignfreealphas() in MKLMulticlass.cpp.o
  17. shogun::CMKLMulticlass::train_machine(shogun::CFeatures*) in MKLMulticlass.cpp.o
  18. std::__1::vector<double, std::__1::allocator<double> >::vector(std::__1::vector<double, std::__1::allocator<double> > const&) in MKLMulticlass.cpp.o
  19. void std::__1::vector<std::__1::vector<double, std::__1::allocator<double> >, std::__1::allocator<std::__1::vector<double, std::__1::allocator<double> > > >::__push_back_slow_path<std::__1::vector<double, std::__1::allocator<double> > const&>(std::__1::vector<double, std::__1::allocator<double> > const&&&) in MKLMulticlass.cpp.o
  20. std::__1::vector<double, std::__1::allocator<double> >::__append(unsigned long) in MKLMulticlass.cpp.o
  21. std::__1::enable_if<(__is_forward_iterator<double*>::value) && (is_constructible<double, std::__1::iterator_traits<double*>::reference>::value), void>::type std::__1::vector<double, std::__1::allocator<double> >::assign<double*>(double*, double*) in MKLMulticlass.cpp.o
  22. shogun::MKLMulticlassGradient::linesearch(std::__1::vector<double, std::__1::allocator<double> >&, std::__1::vector<double, std::__1::allocator<double> > const&) in MKLMulticlassGradient.cpp.o
  23. ...
  24. "std::__1::locale::has_facet(std::__1::locale::id&) const", referenced from:
  25. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  26. "std::__1::locale::use_facet(std::__1::locale::id&) const", referenced from:
  27. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  28. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::imbue(std::__1::locale const&) in SpectrumRBFKernel.cpp.o
  29. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  30. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  31. "std::__1::ios_base::getloc() const", referenced from:
  32. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  33. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  34. "std::__1::__next_prime(unsigned long)", referenced from:
  35. std::__1::__hash_table<std::__1::__hash_value_type<unsigned int, unsigned int>, std::__1::__unordered_map_hasher<unsigned int, std::__1::__hash_value_type<unsigned int, unsigned int>, std::__1::hash<unsigned int>, true>, std::__1::__unordered_map_equal<unsigned int, std::__1::__hash_value_type<unsigned int, unsigned int>, std::__1::equal_to<unsigned int>, true>, std::__1::allocator<std::__1::__hash_value_type<unsigned int, unsigned int> > >::rehash(unsigned long) in BeliefPropagation.cpp.o
  36. std::__1::__hash_table<std::__1::__hash_value_type<unsigned int, std::__1::set<unsigned int, std::__1::less<unsigned int>, std::__1::allocator<unsigned int> > >, std::__1::__unordered_map_hasher<unsigned int, std::__1::__hash_value_type<unsigned int, std::__1::set<unsigned int, std::__1::less<unsigned int>, std::__1::allocator<unsigned int> > >, std::__1::hash<unsigned int>, true>, std::__1::__unordered_map_equal<unsigned int, std::__1::__hash_value_type<unsigned int, std::__1::set<unsigned int, std::__1::less<unsigned int>, std::__1::allocator<unsigned int> > >, std::__1::equal_to<unsigned int>, true>, std::__1::allocator<std::__1::__hash_value_type<unsigned int, std::__1::set<unsigned int, std::__1::less<unsigned int>, std::__1::allocator<unsigned int> > > > >::rehash(unsigned long) in BeliefPropagation.cpp.o
  37. std::__1::__hash_table<std::__1::__hash_value_type<int, int>, std::__1::__unordered_map_hasher<int, std::__1::__hash_value_type<int, int>, std::__1::hash<int>, true>, std::__1::__unordered_map_equal<int, std::__1::__hash_value_type<int, int>, std::__1::equal_to<int>, true>, std::__1::allocator<std::__1::__hash_value_type<int, int> > >::rehash(unsigned long) in BeliefPropagation.cpp.o
  38. "std::__1::__rs_default::~__rs_default()", referenced from:
  39. shogun::CECOCRandomSparseEncoder::create_codebook(int) in ECOCRandomSparseEncoder.cpp.o
  40. "std::__1::__rs_default::operator()()", referenced from:
  41. long std::__1::uniform_int_distribution<long>::operator()<std::__1::__rs_default>(std::__1::__rs_default&, std::__1::uniform_int_distribution<long>::param_type const&) in ECOCRandomSparseEncoder.cpp.o
  42. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::__init(char const*, unsigned long)", referenced from:
  43. shogun::COligoStringKernel::compute(int, int) in OligoStringKernel.cpp.o
  44. shogun::CSpectrumMismatchRBFKernel::compute_all() in SpectrumMismatchRBFKernel.cpp.o
  45. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  46. shogun::CParameterCombination::non_value_tree_multiplication(shogun::CDynamicObjectArray const*, shogun::CParameterCombination const*) in ParameterCombination.cpp.o
  47. shogun::CMultitaskKernelMklNormalizer::init(shogun::CKernel*) in class_list.cpp.o
  48. shogun::CTaxonomy::CTaxonomy() in class_list.cpp.o
  49. shogun::CMultitaskKernelMaskPairNormalizer::init(shogun::CKernel*) in class_list.cpp.o
  50. ...
  51. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::__init(char const*, unsigned long, unsigned long)", referenced from:
  52. shogun::CSpectrumMismatchRBFKernel::compute_helper_all(char const*, std::__1::vector<shogun::joint_list_struct, std::__1::allocator<shogun::joint_list_struct> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, unsigned int) in SpectrumMismatchRBFKernel.cpp.o
  53. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::__init(unsigned long, char)", referenced from:
  54. std::__1::ostreambuf_iterator<char, std::__1::char_traits<char> > std::__1::__pad_and_output<char, std::__1::char_traits<char> >(std::__1::ostreambuf_iterator<char, std::__1::char_traits<char> >, char const*, char const*, char const*, std::__1::ios_base&, char) in brent.cpp.o
  55. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::append(char const*, unsigned long)", referenced from:
  56. shogun::CSpectrumMismatchRBFKernel::compute_all() in SpectrumMismatchRBFKernel.cpp.o
  57. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  58. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::push_back(char)", referenced from:
  59. shogun::CSpectrumMismatchRBFKernel::compute_helper_all(char const*, std::__1::vector<shogun::joint_list_struct, std::__1::allocator<shogun::joint_list_struct> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, unsigned int) in SpectrumMismatchRBFKernel.cpp.o
  60. std::__1::basic_istream<char, std::__1::char_traits<char> >& std::__1::getline<char, std::__1::char_traits<char>, std::__1::allocator<char> >(std::__1::basic_istream<char, std::__1::char_traits<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char) in SpectrumRBFKernel.cpp.o
  61. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::basic_string(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&)", referenced from:
  62. shogun::CSpectrumMismatchRBFKernel::compute_helper_all(char const*, std::__1::vector<shogun::joint_list_struct, std::__1::allocator<shogun::joint_list_struct> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, unsigned int) in SpectrumMismatchRBFKernel.cpp.o
  63. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  64. void std::__1::vector<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, std::__1::allocator<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > > >::__push_back_slow_path<std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&>(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&&&) in SpectrumRBFKernel.cpp.o
  65. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::basic_string(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, unsigned long, unsigned long, std::__1::allocator<char> const&)", referenced from:
  66. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  67. "std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >::~basic_string()", referenced from:
  68. shogun::COligoStringKernel::compute(int, int) in OligoStringKernel.cpp.o
  69. shogun::CSpectrumMismatchRBFKernel::compute_all() in SpectrumMismatchRBFKernel.cpp.o
  70. shogun::CSpectrumMismatchRBFKernel::compute_helper_all(char const*, std::__1::vector<shogun::joint_list_struct, std::__1::allocator<shogun::joint_list_struct> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >, unsigned int) in SpectrumMismatchRBFKernel.cpp.o
  71. shogun::CSpectrumRBFKernel::CSpectrumRBFKernel() in SpectrumRBFKernel.cpp.o
  72. shogun::CSpectrumRBFKernel::CSpectrumRBFKernel(int, double*, int, double) in SpectrumRBFKernel.cpp.o
  73. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  74. shogun::CSpectrumRBFKernel::CSpectrumRBFKernel(shogun::CStringFeatures<char>*, shogun::CStringFeatures<char>*, int, double*, int, double) in SpectrumRBFKernel.cpp.o
  75. ...
  76. "std::__1::basic_istream<char, std::__1::char_traits<char> >::sentry::sentry(std::__1::basic_istream<char, std::__1::char_traits<char> >&, bool)", referenced from:
  77. std::__1::basic_istream<char, std::__1::char_traits<char> >& std::__1::getline<char, std::__1::char_traits<char>, std::__1::allocator<char> >(std::__1::basic_istream<char, std::__1::char_traits<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char) in SpectrumRBFKernel.cpp.o
  78. "std::__1::basic_istream<char, std::__1::char_traits<char> >::~basic_istream()", referenced from:
  79. construction vtable for std::__1::basic_istream<char, std::__1::char_traits<char> >-in-std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  80. "std::__1::basic_istream<char, std::__1::char_traits<char> >::~basic_istream()", referenced from:
  81. construction vtable for std::__1::basic_istream<char, std::__1::char_traits<char> >-in-std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  82. "std::__1::basic_istream<char, std::__1::char_traits<char> >::~basic_istream()", referenced from:
  83. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  84. std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  85. std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  86. non-virtual thunk to std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  87. non-virtual thunk to std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  88. "std::__1::basic_ostream<char, std::__1::char_traits<char> >::sentry::sentry(std::__1::basic_ostream<char, std::__1::char_traits<char> >&)", referenced from:
  89. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  90. "std::__1::basic_ostream<char, std::__1::char_traits<char> >::sentry::~sentry()", referenced from:
  91. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  92. "std::__1::basic_ostream<char, std::__1::char_traits<char> >::operator<<(double)", referenced from:
  93. shogun::local_min_rc(double&, double&, int&, double) in brent.cpp.o
  94. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::uflow()", referenced from:
  95. vtable for std::__1::basic_filebuf<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  96. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::xsgetn(char*, long)", referenced from:
  97. vtable for std::__1::basic_filebuf<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  98. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::xsputn(char const*, long)", referenced from:
  99. vtable for std::__1::basic_filebuf<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  100. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::showmanyc()", referenced from:
  101. vtable for std::__1::basic_filebuf<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  102. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::basic_streambuf()", referenced from:
  103. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  104. "std::__1::basic_streambuf<char, std::__1::char_traits<char> >::~basic_streambuf()", referenced from:
  105. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::~basic_filebuf() in SpectrumRBFKernel.cpp.o
  106. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  107. "std::__1::cout", referenced from:
  108. shogun::local_min_rc(double&, double&, int&, double) in brent.cpp.o
  109. shogun::timestamp() in brent.cpp.o
  110. "std::__1::ctype<char>::id", referenced from:
  111. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  112. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  113. "std::__1::locale::locale(std::__1::locale const&)", referenced from:
  114. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  115. "std::__1::locale::~locale()", referenced from:
  116. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  117. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  118. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  119. "std::__1::codecvt<char, char, __mbstate_t>::id", referenced from:
  120. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::imbue(std::__1::locale const&) in SpectrumRBFKernel.cpp.o
  121. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::basic_filebuf() in SpectrumRBFKernel.cpp.o
  122. "std::__1::__rs_get()", referenced from:
  123. shogun::CECOCRandomSparseEncoder::create_codebook(int) in ECOCRandomSparseEncoder.cpp.o
  124. "std::__1::ios_base::__set_badbit_and_consider_rethrow()", referenced from:
  125. std::__1::basic_istream<char, std::__1::char_traits<char> >& std::__1::getline<char, std::__1::char_traits<char>, std::__1::allocator<char> >(std::__1::basic_istream<char, std::__1::char_traits<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char) in SpectrumRBFKernel.cpp.o
  126. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  127. "std::__1::ios_base::init(void*)", referenced from:
  128. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  129. "std::__1::ios_base::clear(unsigned int)", referenced from:
  130. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  131. std::__1::basic_istream<char, std::__1::char_traits<char> >& std::__1::getline<char, std::__1::char_traits<char>, std::__1::allocator<char> >(std::__1::basic_istream<char, std::__1::char_traits<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char) in SpectrumRBFKernel.cpp.o
  132. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  133. "std::__1::basic_ios<char, std::__1::char_traits<char> >::~basic_ios()", referenced from:
  134. shogun::CSpectrumRBFKernel::read_profiles_and_sequences() in SpectrumRBFKernel.cpp.o
  135. std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  136. std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  137. non-virtual thunk to std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  138. non-virtual thunk to std::__1::basic_ifstream<char, std::__1::char_traits<char> >::~basic_ifstream() in SpectrumRBFKernel.cpp.o
  139. "std::bad_cast::bad_cast()", referenced from:
  140. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::seekoff(long long, std::__1::ios_base::seekdir, unsigned int) in SpectrumRBFKernel.cpp.o
  141. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::sync() in SpectrumRBFKernel.cpp.o
  142. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::underflow() in SpectrumRBFKernel.cpp.o
  143. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::overflow(int) in SpectrumRBFKernel.cpp.o
  144. "std::bad_cast::~bad_cast()", referenced from:
  145. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::seekoff(long long, std::__1::ios_base::seekdir, unsigned int) in SpectrumRBFKernel.cpp.o
  146. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::sync() in SpectrumRBFKernel.cpp.o
  147. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::underflow() in SpectrumRBFKernel.cpp.o
  148. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::overflow(int) in SpectrumRBFKernel.cpp.o
  149. "std::nothrow", referenced from:
  150. shogun::COligoStringKernel::encodeOligo(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, unsigned int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::vector<std::__1::pair<int, double>, std::__1::allocator<std::__1::pair<int, double> > >&) in OligoStringKernel.cpp.o
  151. "std::terminate()", referenced from:
  152. ___clang_call_terminate in Parameter.cpp.o
  153. ___clang_call_terminate in ParameterMap.cpp.o
  154. ___clang_call_terminate in SGObject.cpp.o
  155. ___clang_call_terminate in SGRefObject.cpp.o
  156. ___clang_call_terminate in FeatureBlockLogisticRegression.cpp.o
  157. ___clang_call_terminate in MKL.cpp.o
  158. ___clang_call_terminate in MKLMulticlass.cpp.o
  159. ...
  160. "typeinfo for std::__1::basic_istream<char, std::__1::char_traits<char> >", referenced from:
  161. construction vtable for std::__1::basic_istream<char, std::__1::char_traits<char> >-in-std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  162. typeinfo for std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  163. "typeinfo for std::__1::basic_streambuf<char, std::__1::char_traits<char> >", referenced from:
  164. typeinfo for std::__1::basic_filebuf<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  165. "typeinfo for std::bad_cast", referenced from:
  166. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::seekoff(long long, std::__1::ios_base::seekdir, unsigned int) in SpectrumRBFKernel.cpp.o
  167. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::sync() in SpectrumRBFKernel.cpp.o
  168. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::underflow() in SpectrumRBFKernel.cpp.o
  169. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::overflow(int) in SpectrumRBFKernel.cpp.o
  170. "vtable for __cxxabiv1::__class_type_info", referenced from:
  171. typeinfo for shogun::Parallel in Parallel.cpp.o
  172. typeinfo for shogun::Parameter in Parameter.cpp.o
  173. typeinfo for shogun::DynArray<shogun::TParameter*> in Parameter.cpp.o
  174. typeinfo for shogun::SGParamInfo in ParameterMap.cpp.o
  175. typeinfo for shogun::ParameterMapElement in ParameterMap.cpp.o
  176. typeinfo for shogun::ParameterMap in ParameterMap.cpp.o
  177. typeinfo for shogun::DynArray<shogun::SGParamInfo const*> in ParameterMap.cpp.o
  178. ...
  179. NOTE: a missing vtable usually means the first non-inline virtual member function has no definition.
  180. "vtable for __cxxabiv1::__si_class_type_info", referenced from:
  181. typeinfo for shogun::CSGObject in SGObject.cpp.o
  182. typeinfo for shogun::CAveragedPerceptron in AveragedPerceptron.cpp.o
  183. typeinfo for shogun::CFeatureBlockLogisticRegression in FeatureBlockLogisticRegression.cpp.o
  184. typeinfo for shogun::CMKL in MKL.cpp.o
  185. typeinfo for shogun::CMKLClassification in MKLClassification.cpp.o
  186. typeinfo for shogun::CMKLMulticlass in MKLMulticlass.cpp.o
  187. typeinfo for shogun::MKLMulticlassGLPK in MKLMulticlassGLPK.cpp.o
  188. ...
  189. NOTE: a missing vtable usually means the first non-inline virtual member function has no definition.
  190. "non-virtual thunk to std::__1::basic_istream<char, std::__1::char_traits<char> >::~basic_istream()", referenced from:
  191. construction vtable for std::__1::basic_istream<char, std::__1::char_traits<char> >-in-std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  192. "non-virtual thunk to std::__1::basic_istream<char, std::__1::char_traits<char> >::~basic_istream()", referenced from:
  193. construction vtable for std::__1::basic_istream<char, std::__1::char_traits<char> >-in-std::__1::basic_ifstream<char, std::__1::char_traits<char> > in SpectrumRBFKernel.cpp.o
  194. "operator new(unsigned long, std::nothrow_t const&)", referenced from:
  195. shogun::COligoStringKernel::encodeOligo(std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, unsigned int, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> > const&, std::__1::vector<std::__1::pair<int, double>, std::__1::allocator<std::__1::pair<int, double> > >&) in OligoStringKernel.cpp.o
  196. "___cxa_allocate_exception", referenced from:
  197. shogun::CMKL::train_machine(shogun::CFeatures*) in MKL.cpp.o
  198. shogun::CLibLinear::solve_l2r_l1l2_svc(shogun::liblinear_problem const*, double, double, double, shogun::LIBLINEAR_SOLVER_TYPE) in LibLinear.cpp.o
  199. shogun::CLibLinear::solve_l1r_l2_svc(shogun::liblinear_problem*, double, double, double) in LibLinear.cpp.o
  200. shogun::CLibLinear::solve_l1r_lr(shogun::liblinear_problem const*, double, double, double) in LibLinear.cpp.o
  201. shogun::COnlineSVMSGD::train(shogun::CFeatures*) in OnlineSVMSGD.cpp.o
  202. shogun::CSGDQN::train(shogun::CFeatures*) in SGDQN.cpp.o
  203. shogun::CSVMLight::optimize_to_convergence(int*, int*, int, shogun::SHRINK_STATE*, int*, double*, double*, double*, shogun::TIMING*, double*, int, int) in SVMLight.cpp.o
  204. ...
  205. "___cxa_bad_typeid", referenced from:
  206. shogun::CRandomKitchenSinksDotFeatures::dot(int, shogun::CDotFeatures*, int) in RandomKitchenSinksDotFeatures.cpp.o
  207. "___cxa_begin_catch", referenced from:
  208. ___clang_call_terminate in Parameter.cpp.o
  209. ___clang_call_terminate in ParameterMap.cpp.o
  210. shogun::CSGObject::save_serializable(shogun::CSerializableFile*, char const*, int) in SGObject.cpp.o
  211. shogun::CSGObject::load_serializable(shogun::CSerializableFile*, char const*, int) in SGObject.cpp.o
  212. ___clang_call_terminate in SGObject.cpp.o
  213. ___clang_call_terminate in SGRefObject.cpp.o
  214. ___clang_call_terminate in FeatureBlockLogisticRegression.cpp.o
  215. ...
  216. "___cxa_call_unexpected", referenced from:
  217. shogun::CDynamicArray<unsigned int>::load_serializable_pre() in HashedDocConverter.cpp.o
  218. shogun::CDynamicArray<unsigned int>::save_serializable_pre() in HashedDocConverter.cpp.o
  219. shogun::CLinearHMM::load_serializable_post() in LinearHMM.cpp.o
  220. shogun::CList::load_serializable_post() in CrossValidation.cpp.o
  221. shogun::CDynamicObjectArray::load_serializable_pre() in CrossValidationMulticlassStorage.cpp.o
  222. shogun::CDynamicObjectArray::save_serializable_pre() in CrossValidationMulticlassStorage.cpp.o
  223. shogun::CDynamicArray<int>::load_serializable_pre() in SplittingStrategy.cpp.o
  224. ...
  225. "___cxa_end_catch", referenced from:
  226. shogun::CSGObject::save_serializable(shogun::CSerializableFile*, char const*, int) in SGObject.cpp.o
  227. shogun::CSGObject::load_serializable(shogun::CSerializableFile*, char const*, int) in SGObject.cpp.o
  228. std::__1::basic_istream<char, std::__1::char_traits<char> >& std::__1::getline<char, std::__1::char_traits<char>, std::__1::allocator<char> >(std::__1::basic_istream<char, std::__1::char_traits<char> >&, std::__1::basic_string<char, std::__1::char_traits<char>, std::__1::allocator<char> >&, char) in SpectrumRBFKernel.cpp.o
  229. std::__1::basic_filebuf<char, std::__1::char_traits<char> >::~basic_filebuf() in SpectrumRBFKernel.cpp.o
  230. std::__1::basic_ostream<char, std::__1::char_traits<char> >& std::__1::operator<<<std::__1::char_traits<char> >(std::__1::basic_ostream<char, std::__1::char_traits<char> >&, char const*) in brent.cpp.o
  231. std::__1::deque<shogun::CBinaryTreeMachineNode<shogun::ConditionalProbabilityTreeNodeData>*, std::__1::allocator<shogun::CBinaryTreeMachineNode<shogun::ConditionalProbabilityTreeNodeData>*> >::__add_back_capacity() in ConditionalProbabilityTree.cpp.o
  232. std::__1::deque<shogun::CBinaryTreeMachineNode<shogun::RelaxedTreeNodeData>*, std::__1::allocator<shogun::CBinaryTreeMachineNode<shogun::RelaxedTreeNodeData>*> >::__add_back_capacity() in RelaxedTree.cpp.o
  233. ...
  234. "___cxa_free_exception", referenced from:
  235. shogun::CMKL::train_machine(shogun::CFeatures*) in MKL.cpp.o
  236. shogun::CLibLinear::solve_l2r_l1l2_svc(shogun::liblinear_problem const*, double, double, double, shogun::LIBLINEAR_SOLVER_TYPE) in LibLinear.cpp.o
  237. shogun::CLibLinear::solve_l1r_l2_svc(shogun::liblinear_problem*, double, double, double) in LibLinear.cpp.o
  238. shogun::CLibLinear::solve_l1r_lr(shogun::liblinear_problem const*, double, double, double) in LibLinear.cpp.o
  239. shogun::COnlineSVMSGD::train(shogun::CFeatures*) in OnlineSVMSGD.cpp.o
  240. shogun::CSGDQN::train(shogun::CFeatures*) in SGDQN.cpp.o
  241. shogun::CSVMLight::optimize_to_convergence(int*, int*, int, shogun::SHRINK_STATE*, int*, double*, double*, double*, shogun::TIMING*, double*, int, int) in SVMLight.cpp.o
  242. ...
  243. "___cxa_guard_acquire", referenced from:
  244. shogun::CWeightedDegreePositionStringKernel::extract_w(int, int&, int&, double*, int, int*, double*) in WeightedDegreePositionStringKernel.cpp.o
  245. shogun::CWeightedDegreePositionStringKernel::compute_POIM(int, int&, int&, double*, int, int*, double*, double*) in WeightedDegreePositionStringKernel.cpp.o
  246. shogun::CStatistics::lnormal_cdf(double) in Statistics.cpp.o
  247. "___cxa_guard_release", referenced from:
  248. shogun::CWeightedDegreePositionStringKernel::extract_w(int, int&, int&, double*, int, int*, double*) in WeightedDegreePositionStringKernel.cpp.o
  249. shogun::CWeightedDegreePositionStringKernel::compute_POIM(int, int&, int&, double*, int, int*, double*, double*) in WeightedDegreePositionStringKernel.cpp.o
  250. shogun::CStatistics::lnormal_cdf(double) in Statistics.cpp.o
  251. "___cxa_pure_virtual", referenced from:
  252. vtable for shogun::CSGObject in SGObject.cpp.o
  253. vtable for shogun::SGRefObject in SGRefObject.cpp.o
  254. vtable for shogun::CMKL in MKL.cpp.o
  255. vtable for shogun::CVwCacheReader in VwCacheReader.cpp.o
  256. vtable for shogun::CVwCacheWriter in VwCacheWriter.cpp.o
  257. vtable for shogun::CVwLearner in VwAdaptiveLearner.cpp.o
  258. vtable for shogun::CVwLearner in VwNonAdaptiveLearner.cpp.o
  259. ...
  260. "___cxa_rethrow", referenced from:
  261. std::__1::deque<shogun::CBinaryTreeMachineNode<shogun::ConditionalProbabilityTreeNodeData>*, std::__1::allocator<shogun::CBinaryTreeMachineNode<shogun::ConditionalProbabilityTreeNodeData>*> >::__add_back_capacity() in ConditionalProbabilityTree.cpp.o
  262. std::__1::deque<shogun::CBinaryTreeMachineNode<shogun::RelaxedTreeNodeData>*, std::__1::allocator<shogun::CBinaryTreeMachineNode<shogun::RelaxedTreeNodeData>*> >::__add_back_capacity() in RelaxedTree.cpp.o
  263. std::__1::deque<shogun::CBinaryTreeMachineNode<shogun::VwConditionalProbabilityTreeNodeData>*, std::__1::allocator<shogun::CBinaryTreeMachineNode<shogun::VwConditionalProbabilityTreeNodeData>*> >::__add_back_capacity() in VwConditionalProbabilityTree.cpp.o
  264. std::__1::deque<shogun::GraphNode*, std::__1::allocator<shogun::GraphNode*> >::__add_back_capacity() in BeliefPropagation.cpp.o
  265. "___cxa_throw", referenced from:
  266. shogun::CMKL::train_machine(shogun::CFeatures*) in MKL.cpp.o
  267. shogun::CLibLinear::solve_l2r_l1l2_svc(shogun::liblinear_problem const*, double, double, double, shogun::LIBLINEAR_SOLVER_TYPE) in LibLinear.cpp.o
  268. shogun::CLibLinear::solve_l1r_l2_svc(shogun::liblinear_problem*, double, double, double) in LibLinear.cpp.o
  269. shogun::CLibLinear::solve_l1r_lr(shogun::liblinear_problem const*, double, double, double) in LibLinear.cpp.o
  270. shogun::COnlineSVMSGD::train(shogun::CFeatures*) in OnlineSVMSGD.cpp.o
  271. shogun::CSGDQN::train(shogun::CFeatures*) in SGDQN.cpp.o
  272. shogun::CSVMLight::optimize_to_convergence(int*, int*, int, shogun::SHRINK_STATE*, int*, double*, double*, double*, shogun::TIMING*, double*, int, int) in SVMLight.cpp.o
  273. ...
  274. "___dynamic_cast", referenced from:
  275. shogun::CMKLMulticlass::initsvm() in MKLMulticlass.cpp.o
  276. shogun::CMKLMulticlass::initlpsolver() in MKLMulticlass.cpp.o
  277. shogun::CMKLMulticlass::addingweightsstep(std::__1::vector<double, std::__1::allocator<double> > const&) in MKLMulticlass.cpp.o
  278. shogun::CMKLMulticlass::getsumofsignfreealphas() in MKLMulticlass.cpp.o
  279. shogun::CMKLMulticlass::getsquarenormofprimalcoefficients(int) in MKLMulticlass.cpp.o
  280. shogun::CMKLMulticlass::train_machine(shogun::CFeatures*) in MKLMulticlass.cpp.o
  281. shogun::CMulticlassSVM::is_acceptable_machine(shogun::CMachine*) in MKLMulticlass.cpp.o
  282. ...
  283. "___gxx_personality_v0", referenced from:
  284. shogun::init_shogun(void (*)(__sFILE*, char const*), void (*)(__sFILE*, char const*), void (*)(__sFILE*, char const*), void (*)(bool&, bool&)) in init.cpp.o
  285. Dwarf Exception Unwind Info (__eh_frame) in init.cpp.o
  286. shogun::TParameter::~TParameter() in Parameter.cpp.o
  287. shogun::TParameter::load(shogun::CSerializableFile*, char const*) in Parameter.cpp.o
  288. shogun::Parameter::Parameter() in Parameter.cpp.o
  289. shogun::Parameter::~Parameter() in Parameter.cpp.o
  290. shogun::Parameter::add_type(shogun::TSGDataType const*, void*, char const*, char const*) in Parameter.cpp.o
  291. ...
  292. ld: symbol(s) not found for architecture x86_64
  293. clang: error: linker command failed with exit code 1 (use -v to see invocation)
  294. make[2]: *** [src/shogun/libshogun.16.1.dylib] Error 1
  295. make[1]: *** [src/shogun/CMakeFiles/shogun.dir/all] Error 2
  296. make: *** [all] Error 2
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