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Answer to http://biostar.stackexchange.com/questions/5511

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Mar 20th, 2011
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  1. <?xml version="1.0" encoding="UTF-8"?><soapenv:Envelope xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/" xmlns:xsd="http://www.w3.org/1999/XMLSchema" xmlns:xsi="http://www.w3.org/1999/XMLSchema-instance"><soapenv:Body><ns1:queryPathwaysForReferenceIdentifiersResponse soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xmlns:ns1="http://www.reactome.org:8080/caBIOWebApp/services/caBIOService"><queryPathwaysForReferenceIdentifiersReturn soapenc:arrayType="ns2:Pathway[3]" xsi:type="soapenc:Array" xmlns:ns2="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><queryPathwaysForReferenceIdentifiersReturn href="#id0"/><queryPathwaysForReferenceIdentifiersReturn href="#id1"/><queryPathwaysForReferenceIdentifiersReturn href="#id2"/></queryPathwaysForReferenceIdentifiersReturn></ns1:queryPathwaysForReferenceIdentifiersResponse><multiRef id="id1" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns3:Pathway" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/" xmlns:ns3="http://www.reactome.org/caBIOWebApp/schema"><compartment xsi:type="ns3:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string">Cell Cycle, Mitotic</evidenceType><goBiologicalProcess href="#id3"/><hasComponent href="#id4"/><id href="#id5"/><inferredFrom xsi:type="ns3:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns3:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Cell Cycle, Mitotic</name><orthologousEvent href="#id6"/><precedingEvent xsi:type="ns3:ArrayOfAnyType" xsi:null="true"/><species href="#id7"/><summation href="#id8"/></multiRef><multiRef id="id2" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns4:Pathway" xmlns:ns4="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment href="#id9"/><evidenceType xsi:type="soapenc:string">DNA Replication</evidenceType><goBiologicalProcess xsi:type="ns4:GeneOntology" xsi:null="true"/><hasComponent href="#id10"/><id href="#id11"/><inferredFrom xsi:type="ns4:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns4:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">DNA Replication</name><orthologousEvent href="#id12"/><precedingEvent xsi:type="ns4:ArrayOfAnyType" xsi:null="true"/><species href="#id7"/><summation href="#id13"/></multiRef><multiRef id="id0" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns5:Pathway" xmlns:ns5="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment href="#id9"/><evidenceType xsi:type="soapenc:string">Transcription</evidenceType><goBiologicalProcess href="#id14"/><hasComponent href="#id15"/><id href="#id16"/><inferredFrom xsi:type="ns5:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns5:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Transcription</name><orthologousEvent href="#id17"/><precedingEvent xsi:type="ns5:ArrayOfAnyType" xsi:null="true"/><species href="#id7"/><summation href="#id18"/></multiRef><multiRef id="id12" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns6:ArrayOfAnyType[18]" xsi:type="soapenc:Array" xmlns:ns6="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id19"/><multiRef href="#id20"/><multiRef href="#id21"/><multiRef href="#id22"/><multiRef href="#id23"/><multiRef href="#id24"/><multiRef href="#id25"/><multiRef href="#id26"/><multiRef href="#id27"/><multiRef href="#id28"/><multiRef href="#id29"/><multiRef href="#id30"/><multiRef href="#id31"/><multiRef href="#id32"/><multiRef href="#id33"/><multiRef href="#id34"/><multiRef href="#id35"/><multiRef href="#id36"/></multiRef><multiRef id="id14" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns7:GeneOntology" xmlns:ns7="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><childGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/><geneCollection xsi:type="soapenc:Array" xsi:null="true"/><id href="#id37"/><name xsi:type="soapenc:string">transcription</name><parentGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/></multiRef><multiRef id="id15" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns8:ArrayOfAnyType[2]" xsi:type="soapenc:Array" xmlns:ns8="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id38"/><multiRef href="#id39"/></multiRef><multiRef id="id4" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns9:ArrayOfAnyType[6]" xsi:type="soapenc:Array" xmlns:ns9="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id40"/><multiRef href="#id41"/><multiRef href="#id42"/><multiRef href="#id43"/><multiRef href="#id44"/><multiRef href="#id45"/></multiRef><multiRef id="id5" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns10:long" xmlns:ns10="http://www.w3.org/2001/XMLSchema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">69278</multiRef><multiRef id="id18" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns11:ArrayOfAnyType[1]" xsi:type="soapenc:Array" xmlns:ns11="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id46"/></multiRef><multiRef id="id16" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns12:long" xmlns:ns12="http://www.w3.org/2001/XMLSchema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">74159</multiRef><multiRef id="id17" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns13:ArrayOfAnyType[17]" xsi:type="soapenc:Array" xmlns:ns13="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id47"/><multiRef href="#id48"/><multiRef href="#id49"/><multiRef href="#id50"/><multiRef href="#id51"/><multiRef href="#id52"/><multiRef href="#id53"/><multiRef href="#id54"/><multiRef href="#id55"/><multiRef href="#id56"/><multiRef href="#id57"/><multiRef href="#id58"/><multiRef href="#id59"/><multiRef href="#id60"/><multiRef href="#id61"/><multiRef href="#id62"/><multiRef href="#id63"/></multiRef><multiRef id="id6" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns14:ArrayOfAnyType[18]" xsi:type="soapenc:Array" xmlns:ns14="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id64"/><multiRef href="#id65"/><multiRef href="#id66"/><multiRef href="#id67"/><multiRef href="#id68"/><multiRef href="#id69"/><multiRef href="#id70"/><multiRef href="#id71"/><multiRef href="#id72"/><multiRef href="#id73"/><multiRef href="#id74"/><multiRef href="#id75"/><multiRef href="#id76"/><multiRef href="#id77"/><multiRef href="#id78"/><multiRef href="#id79"/><multiRef href="#id80"/><multiRef href="#id81"/></multiRef><multiRef id="id8" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns15:ArrayOfAnyType[1]" xsi:type="soapenc:Array" xmlns:ns15="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id82"/></multiRef><multiRef id="id13" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns16:ArrayOfAnyType[1]" xsi:type="soapenc:Array" xmlns:ns16="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id83"/></multiRef><multiRef id="id9" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns17:GeneOntology" xmlns:ns17="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><childGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/><geneCollection xsi:type="soapenc:Array" xsi:null="true"/><id href="#id84"/><name xsi:type="soapenc:string">nucleus</name><parentGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/></multiRef><multiRef id="id10" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" soapenc:arrayType="ns18:ArrayOfAnyType[3]" xsi:type="soapenc:Array" xmlns:ns18="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><multiRef href="#id85"/><multiRef href="#id86"/><multiRef href="#id87"/></multiRef><multiRef id="id7" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns19:Taxon" xmlns:ns19="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><abbreviation xsi:type="soapenc:string" xsi:null="true"/><chromosomeCollection xsi:type="soapenc:Array" xsi:null="true"/><cloneCollection xsi:type="soapenc:Array" xsi:null="true"/><commonName xsi:type="soapenc:string" xsi:null="true"/><ethnicityStrain xsi:type="soapenc:string" xsi:null="true"/><geneCollection xsi:type="soapenc:Array" xsi:null="true"/><id href="#id88"/><pathwayCollection xsi:type="soapenc:Array" xsi:null="true"/><proteinCollection xsi:type="soapenc:Array" xsi:null="true"/><scientificName xsi:type="soapenc:string">Homo sapiens</scientificName><tissueCollection xsi:type="soapenc:Array" xsi:null="true"/></multiRef><multiRef id="id3" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns20:GeneOntology" xmlns:ns20="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><childGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/><geneCollection xsi:type="soapenc:Array" xsi:null="true"/><id href="#id89"/><name xsi:type="soapenc:string">mitotic cell cycle</name><parentGeneOntologyRelationshipCollection xsi:type="soapenc:Array" xsi:null="true"/></multiRef><multiRef id="id11" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns21:long" xmlns:ns21="http://www.w3.org/2001/XMLSchema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/">69306</multiRef><multiRef id="id26" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns22:Pathway" xmlns:ns22="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns22:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns22:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/><id href="#id90"/><inferredFrom xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">DNA Replication</name><orthologousEvent xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns22:Taxon" xsi:null="true"/><summation xsi:type="ns22:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id32" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns23:Pathway" xmlns:ns23="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns23:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns23:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/><id href="#id91"/><inferredFrom xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">DNA Replication</name><orthologousEvent xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns23:Taxon" xsi:null="true"/><summation xsi:type="ns23:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id85" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns24:Pathway" xmlns:ns24="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns24:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns24:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/><id href="#id92"/><inferredFrom xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Mitotic M-M/G1 phases</name><orthologousEvent xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns24:Taxon" xsi:null="true"/><summation xsi:type="ns24:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id42" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns25:Pathway" xmlns:ns25="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns25:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns25:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/><id href="#id93"/><inferredFrom xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Regulation of DNA replication</name><orthologousEvent xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns25:Taxon" xsi:null="true"/><summation xsi:type="ns25:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id28" soapenc:root="0" 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soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns27:Pathway" xmlns:ns27="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns27:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns27:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/><id href="#id95"/><inferredFrom xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Transcription</name><orthologousEvent xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns27:Taxon" xsi:null="true"/><summation xsi:type="ns27:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id80" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="ns28:Pathway" xmlns:ns28="http://www.reactome.org/caBIOWebApp/schema" xmlns:soapenc="http://schemas.xmlsoap.org/soap/encoding/"><compartment xsi:type="ns28:GeneOntology" xsi:null="true"/><evidenceType xsi:type="soapenc:string" xsi:null="true"/><goBiologicalProcess xsi:type="ns28:GeneOntology" xsi:null="true"/><hasComponent xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/><id href="#id96"/><inferredFrom xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/><literatureReference xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/><name xsi:type="soapenc:string">Cell Cycle, Mitotic</name><orthologousEvent xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/><precedingEvent xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/><species xsi:type="ns28:Taxon" xsi:null="true"/><summation xsi:type="ns28:ArrayOfAnyType" xsi:null="true"/></multiRef><multiRef id="id89" soapenc:root="0" soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" xsi:type="soapenc:long" 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