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  1. This is XeTeX, Version 3.14159265-2.6-0.99992 (TeX Live 2015/Debian) (preloaded format=xelatex 2016.12.5) 10 DEC 2016 10:22
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  5. **opsa_mef.tex
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  902. LaTeX Font Info: ... okay on input line 51.
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  912. LaTeX Font Info: ... okay on input line 51.
  913. LaTeX Font Info: Checking defaults for EU1/lmr/m/n on input line 51.
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  915. LaTeX Font Info: Checking defaults for T3/cmr/m/n on input line 51.
  916. LaTeX Font Info: Try loading font information for T3+cmr on input line 51.
  917. (/usr/share/texmf/tex/latex/tipa/t3cmr.fd
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  920. LaTeX Font Info: ... okay on input line 51.
  921. LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 51.
  922. LaTeX Font Info: Try loading font information for TS1+cmr on input line 51.
  923.  
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  927. LaTeX Font Info: ... okay on input line 51.
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  931. LaTeX Font Info: ... okay on input line 51.
  932.  
  933. *geometry* driver: auto-detecting
  934. *geometry* detected driver: xetex
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  966.  
  967. .................................................
  968. . fontspec info: "setup-math"
  969. .
  970. . Adjusting the maths setup (use [no-math] to avoid this).
  971. .................................................
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  990. LaTeX Font Info: Redeclaring math symbol \Pi on input line 51.
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  994. LaTeX Font Info: Redeclaring math symbol \Psi on input line 51.
  995. LaTeX Font Info: Redeclaring math symbol \Omega on input line 51.
  996. LaTeX Font Info: Redeclaring math symbol \mathdollar on input line 51.
  997. LaTeX Font Info: Redeclaring symbol font `operators' on input line 51.
  998. LaTeX Font Info: Encoding `OT1' has changed to `EU1' for symbol font
  999. (Font) `operators' in the math version `normal' on input line 51.
  1000. LaTeX Font Info: Overwriting symbol font `operators' in version `normal'
  1001. (Font) OT1/cmr/m/n --> EU1/lmr/m/n on input line 51.
  1002. LaTeX Font Info: Encoding `OT1' has changed to `EU1' for symbol font
  1003. (Font) `operators' in the math version `bold' on input line 51.
  1004. LaTeX Font Info: Overwriting symbol font `operators' in version `bold'
  1005. (Font) OT1/cmr/bx/n --> EU1/lmr/m/n on input line 51.
  1006. LaTeX Font Info: Overwriting symbol font `operators' in version `normal'
  1007. (Font) EU1/lmr/m/n --> EU1/lmr/m/n on input line 51.
  1008. LaTeX Font Info: Overwriting math alphabet `\mathit' in version `normal'
  1009. (Font) OT1/cmr/m/it --> EU1/lmr/m/it on input line 51.
  1010. LaTeX Font Info: Overwriting math alphabet `\mathbf' in version `normal'
  1011. (Font) OT1/cmr/bx/n --> EU1/lmr/bx/n on input line 51.
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  1016. LaTeX Font Info: Overwriting symbol font `operators' in version `bold'
  1017. (Font) EU1/lmr/m/n --> EU1/lmr/bx/n on input line 51.
  1018. LaTeX Font Info: Overwriting math alphabet `\mathit' in version `bold'
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  1020. LaTeX Font Info: Overwriting math alphabet `\mathsf' in version `bold'
  1021. (Font) OT1/cmss/bx/n --> EU1/lmss/bx/n on input line 51.
  1022. LaTeX Font Info: Overwriting math alphabet `\mathtt' in version `bold'
  1023. (Font) OT1/cmtt/m/n --> EU1/lmtt/bx/n on input line 51.
  1024. \AtBeginShipoutBox=\box61
  1025. Package hyperref Info: Link coloring ON on input line 51.
  1026. (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
  1027. Package: nameref 2012/10/27 v2.43 Cross-referencing by name of section
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  1029. (/usr/share/texlive/texmf-dist/tex/generic/oberdiek/gettitlestring.sty
  1030. Package: gettitlestring 2010/12/03 v1.4 Cleanup title references (HO)
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  1036. LaTeX Info: Redefining \nameref on input line 51.
  1037.  
  1038. (./opsa_mef.out) (./opsa_mef.out)
  1039. \@outlinefile=\write5
  1040. \openout5 = `opsa_mef.out'.
  1041.  
  1042. File: opsa_logo.pdf Graphic file (type QTm)
  1043. <use "opsa_logo.pdf" > [1
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  1050. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd
  1051. File: umsa.fd 2013/01/14 v3.01 AMS symbols A
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  1054.  
  1055. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd
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  1061. [][]
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  1064. (./opsa_mef.toc [2
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  1066. ] [3])
  1067. \tf@toc=\write6
  1068. \openout6 = `opsa_mef.toc'.
  1069.  
  1070. [4]
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  1075. (./opsa_mef.lot)
  1076. \tf@lot=\write7
  1077. \openout7 = `opsa_mef.lot'.
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  1079. [5
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  1083. [][]
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  1086. (./opsa_mef.lof)
  1087. \tf@lof=\write8
  1088. \openout8 = `opsa_mef.lof'.
  1089.  
  1090. [6
  1091.  
  1092. ]
  1093. Chapter 1.
  1094. File: opsa_logo.pdf Graphic file (type QTm)
  1095. <use "opsa_logo.pdf" > [1
  1096.  
  1097.  
  1098. ]
  1099.  
  1100. Package Fancyhdr Warning: \headheight is too small (12.0pt):
  1101. Make it at least 14.49998pt.
  1102. We now make it that large for the rest of the document.
  1103. This may cause the page layout to be inconsistent, however.
  1104.  
  1105. [2]
  1106. Chapter 2.
  1107. [3
  1108.  
  1109. ]
  1110. Underfull \hbox (badness 10000) in paragraph at lines 280--287
  1111. []\EU1/lmr/m/n/12 As more
  1112. []
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  1114. [4] [5]
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  1116. .
  1117. (/usr/share/texlive/texmf-dist/tex/latex/euenc/eu1lmtt.fd
  1118. File: eu1lmtt.fd 2009/10/30 v1.6 Font defs for Latin Modern
  1119. )
  1120. File: architecture.pdf Graphic file (type QTm)
  1121.  
  1122. <use "architecture.pdf" > [6] [7] [8]
  1123. Chapter 3.
  1124. [9
  1125.  
  1126. ]
  1127. Underfull \hbox (badness 10000) in paragraph at lines 601--612
  1128. []\EU1/lmr/m/n/12 Boolean formulae,
  1129. []
  1130.  
  1131. [10] [11]
  1132. File: anatomy.pdf Graphic file (type QTm)
  1133. <use "anatomy.pdf" > [12] [13]
  1134. LaTeX Font Info: Font shape `EU1/lmtt/bx/n' in size <10.95> not available
  1135. (Font) Font shape `EU1/lmtt/b/n' tried instead on input line 800.
  1136. [14]
  1137. Chapter 4.
  1138. [15
  1139.  
  1140. ]
  1141. File: fault_tree.pdf Graphic file (type QTm)
  1142. <use "fault_tree.pdf" > [16]
  1143. Package hyperref Info: bookmark level for unknown literalblock defaults to 0 on
  1144. input line 942.
  1145. [17] [18]
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  1148.  
  1149. [19] [20]
  1150. File: fault_tree_with_components.pdf Graphic file (type QTm)
  1151. <use "fault_tree_with_components.pdf" > [21] [22] [23] [24]
  1152. Chapter 5.
  1153. [25
  1154.  
  1155. ] [26] [27] [28] [29] [30] [31]
  1156. Underfull \hbox (badness 10000) in paragraph at lines 2074--2082
  1157. []\EU1/lmr/m/n/12 This
  1158. []
  1159.  
  1160. File: periodic_test.png Graphic file (type QTm)
  1161. <use "periodic_test.png" > [32]
  1162. File: multi_phase_markov_graph.png Graphic file (type QTm)
  1163. <use "multi_phase_markov_graph.png" >
  1164. [33] [34] [35] [36] [37]
  1165. File: lambda_histogram.pdf Graphic file (type QTm)
  1166. <use "lambda_histogram.pdf" > [38] [39] [40]
  1167. Chapter 6.
  1168. [41
  1169.  
  1170. ] [42] [43] [44] [45] [46] [47] [48]
  1171. Chapter 7.
  1172. File: small_event_tree.pdf Graphic file (type QTm)
  1173. <use "small_event_tree.pdf" > [49
  1174.  
  1175. ] [50]
  1176. File: event_tree_structure.pdf Graphic file (type QTm)
  1177. <use "event_tree_structure.pdf" >
  1178. [51] [52]
  1179. Underfull \vbox (badness 1365) detected at line 3557
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  1182. [53] [54] [55] [56] [57]
  1183. Overfull \vbox (1.19319pt too high) detected at line 3832
  1184. []
  1185.  
  1186. [58] [59]
  1187. Chapter 8.
  1188.  
  1189. Overfull \vbox (1.31749pt too high) detected at line 3895
  1190. []
  1191.  
  1192. [60
  1193.  
  1194. ] [61]
  1195. File: containers_and_constructs.pdf Graphic file (type QTm)
  1196. <use "containers_and_constructs.pdf" > [62] [63] [64]
  1197. Chapter 9.
  1198. [65
  1199.  
  1200. ] [66] [67] [68]
  1201. Chapter 10.
  1202. [69
  1203.  
  1204. ] [70]
  1205. Appendix A.
  1206. [71
  1207.  
  1208. ] [72]
  1209. Appendix B.
  1210. [73
  1211.  
  1212. ]
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  1277. Appendix C.
  1278. [83
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  1280. ] [84] [85] [86] [87]
  1281. Underfull \vbox (badness 2809) detected at line 5276
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  1294. [92]
  1295. Package atveryend Info: Empty hook `AfterLastShipout' on input line 5433.
  1296. (./opsa_mef.aux)
  1297. Package atveryend Info: Empty hook `AtVeryEndDocument' on input line 5433.
  1298.  
  1299.  
  1300. *File List*
  1301. sphinxmanual.cls 2016/10/12 v1.5 Document class (Sphinx manual)
  1302. report.cls 2014/09/29 v1.4h Standard LaTeX document class
  1303. size12.clo 2014/09/29 v1.4h Standard LaTeX file (size option)
  1304. geometry.sty 2010/09/12 v5.6 Page Geometry
  1305. keyval.sty 2014/10/28 v1.15 key=value parser (DPC)
  1306. ifpdf.sty 2011/01/30 v2.3 Provides the ifpdf switch (HO)
  1307. ifvtex.sty 2010/03/01 v1.5 Detect VTeX and its facilities (HO)
  1308. ifxetex.sty 2010/09/12 v0.6 Provides ifxetex conditional
  1309. cmap.sty 2008/03/06 v1.0h CMap support: searchable PDF
  1310. amsmath.sty 2016/03/03 v2.15a AMS math features
  1311. amstext.sty 2000/06/29 v2.01 AMS text
  1312. amsgen.sty 1999/11/30 v2.0 generic functions
  1313. amsbsy.sty 1999/11/29 v1.2d Bold Symbols
  1314. amsopn.sty 1999/12/14 v2.01 operator names
  1315. amssymb.sty 2013/01/14 v3.01 AMS font symbols
  1316. amsfonts.sty 2013/01/14 v3.01 Basic AMSFonts support
  1317. polyglossia.sty 2015/08/06 v1.42.0 Alternative to Babel for XeLaTeX and LuaL
  1318. aTeX
  1319. etoolbox.sty 2015/08/02 v2.2a e-TeX tools for LaTeX (JAW)
  1320. makecmds.sty 2009/09/03 v1.0a extra command making commands
  1321. xkeyval.sty 2014/12/03 v2.7a package option processing (HA)
  1322. xkeyval.tex 2014/12/03 v2.7a key=value parser (HA)
  1323. fontspec.sty 2016/02/01 v2.5a Font selection for XeLaTeX and LuaLaTeX
  1324. expl3.sty 2016/01/19 v6377 L3 programming layer (loader)
  1325. expl3-code.tex 2016/01/19 v6377 L3 programming layer
  1326. l3xdvipdfmx.def
  1327. xparse.sty 2016/01/19 v6377 L3 Experimental document command parser
  1328. fontspec-xetex.sty 2016/02/01 v2.5a Font selection for XeLaTeX and LuaLaTeX
  1329. fontenc.sty
  1330. eu1enc.def 2010/05/27 v0.1h Experimental Unicode font encodings
  1331. eu1lmr.fd 2009/10/30 v1.6 Font defs for Latin Modern
  1332. xunicode.sty 2011/09/09 v0.981 provides access to latin accents and many oth
  1333. er characters in Unicode lower plane
  1334. eu1lmss.fd 2009/10/30 v1.6 Font defs for Latin Modern
  1335. graphicx.sty 2014/10/28 v1.0g Enhanced LaTeX Graphics (DPC,SPQR)
  1336. graphics.sty 2016/01/03 v1.0q Standard LaTeX Graphics (DPC,SPQR)
  1337. trig.sty 2016/01/03 v1.10 sin cos tan (DPC)
  1338. graphics.cfg 2010/04/23 v1.9 graphics configuration of TeX Live
  1339. xetex.def 2015/09/11 v4.06 LaTeX color/graphics driver for XeTeX (TeX Liv
  1340. e/RRM/JK)
  1341. infwarerr.sty 2010/04/08 v1.3 Providing info/warning/error messages (HO)
  1342. ltxcmds.sty 2011/11/09 v1.22 LaTeX kernel commands for general use (HO)
  1343. fontspec.cfg
  1344. ifluatex.sty 2010/03/01 v1.3 Provides the ifluatex switch (HO)
  1345. gloss-english.ldf polyglossia: module for english
  1346. fncychap.sty 2007/07/30 v1.34 LaTeX package (Revised chapters)
  1347. longtable.sty 2014/10/28 v4.11 Multi-page Table package (DPC)
  1348. sphinx.sty 2016/10/29 v1.5 LaTeX package (Sphinx markup)
  1349. fancyhdr.sty
  1350. textcomp.sty 2005/09/27 v1.99g Standard LaTeX package
  1351. ts1enc.def 2001/06/05 v3.0e (jk/car/fm) Standard LaTeX file
  1352. titlesec.sty 2016/03/15 v2.10.1 Sectioning titles
  1353. tabulary.sty 2008/12/01 v0.9 tabulary package (DPC)
  1354. array.sty 2014/10/28 v2.4c Tabular extension package (FMi)
  1355. makeidx.sty 2014/09/29 v1.0m Standard LaTeX package
  1356. framed.sty 2011/10/22 v 0.96: framed or shaded text with page breaks
  1357. xcolor.sty 2007/01/21 v2.11 LaTeX color extensions (UK)
  1358. color.cfg 2007/01/18 v1.5 color configuration of teTeX/TeXLive
  1359. fancyvrb.sty 2008/02/07
  1360. threeparttable.sty 2003/06/13 v 3.0
  1361. footnotehyper-sphinx.sty 2016/10/27 v0.9f hyperref aware footnote.sty for sp
  1362. hinx (JFB)
  1363. footnote.sty 1997/01/28 1.13 Save footnotes around boxes
  1364. float.sty 2001/11/08 v1.3d Float enhancements (AL)
  1365. wrapfig.sty 2003/01/31 v 3.6
  1366. parskip.sty 2001/04/09 non-zero parskip adjustments
  1367. alltt.sty 1997/06/16 v2.0g defines alltt environment
  1368. upquote.sty 2012/04/19 v1.3 upright-quote and grave-accent glyphs in verbat
  1369. im
  1370. kvoptions.sty 2011/06/30 v3.11 Key value format for package options (HO)
  1371. kvsetkeys.sty 2012/04/25 v1.16 Key value parser (HO)
  1372. etexcmds.sty 2011/02/16 v1.5 Avoid name clashes with e-TeX commands (HO)
  1373. capt-of.sty 2009/12/29 v0.2 standard captions outside of floats
  1374. needspace.sty 2010/09/12 v1.3d reserve vertical space
  1375. sphinxhighlight.sty 2016/05/29 stylesheet for highlighting with pygments
  1376. multirow.sty
  1377. eqparbox.sty 2013/03/15 v4.0 Create equal-widthed boxes
  1378. environ.sty 2014/05/04 v0.3 A new way to define environments
  1379. trimspaces.sty 2009/09/17 v1.1 Trim spaces around a token list
  1380. hyperref.sty 2012/11/06 v6.83m Hypertext links for LaTeX
  1381. hobsub-hyperref.sty 2012/05/28 v1.13 Bundle oberdiek, subset hyperref (HO)
  1382. hobsub-generic.sty 2012/05/28 v1.13 Bundle oberdiek, subset generic (HO)
  1383. hobsub.sty 2012/05/28 v1.13 Construct package bundles (HO)
  1384. intcalc.sty 2007/09/27 v1.1 Expandable calculations with integers (HO)
  1385. kvdefinekeys.sty 2011/04/07 v1.3 Define keys (HO)
  1386. pdftexcmds.sty 2011/11/29 v0.20 Utility functions of pdfTeX for LuaTeX (HO)
  1387. pdfescape.sty 2011/11/25 v1.13 Implements pdfTeX's escape features (HO)
  1388. bigintcalc.sty 2012/04/08 v1.3 Expandable calculations on big integers (HO)
  1389. bitset.sty 2011/01/30 v1.1 Handle bit-vector datatype (HO)
  1390. uniquecounter.sty 2011/01/30 v1.2 Provide unlimited unique counter (HO)
  1391. letltxmacro.sty 2010/09/02 v1.4 Let assignment for LaTeX macros (HO)
  1392. hopatch.sty 2012/05/28 v1.2 Wrapper for package hooks (HO)
  1393. xcolor-patch.sty 2011/01/30 xcolor patch
  1394. atveryend.sty 2011/06/30 v1.8 Hooks at the very end of document (HO)
  1395. atbegshi.sty 2011/10/05 v1.16 At begin shipout hook (HO)
  1396. refcount.sty 2011/10/16 v3.4 Data extraction from label references (HO)
  1397. hycolor.sty 2011/01/30 v1.7 Color options for hyperref/bookmark (HO)
  1398. auxhook.sty 2011/03/04 v1.3 Hooks for auxiliary files (HO)
  1399. pd1enc.def 2012/11/06 v6.83m Hyperref: PDFDocEncoding definition (HO)
  1400. hyperref.cfg 2002/06/06 v1.2 hyperref configuration of TeXLive
  1401. puenc.def 2012/11/06 v6.83m Hyperref: PDF Unicode definition (HO)
  1402. url.sty 2013/09/16 ver 3.4 Verb mode for urls, etc.
  1403. hxetex.def 2012/11/06 v6.83m Hyperref driver for XeTeX
  1404. stringenc.sty 2011/12/02 v1.10 Convert strings between diff. encodings (HO)
  1405. rerunfilecheck.sty 2011/04/15 v1.7 Rerun checks for auxiliary files (HO)
  1406. hypcap.sty 2011/02/16 v1.11 Adjusting the anchors of captions (HO)
  1407. t3cmr.fd 2001/12/31 TIPA font definitions
  1408. ts1cmr.fd 2014/09/29 v2.5h Standard LaTeX font definitions
  1409. nameref.sty 2012/10/27 v2.43 Cross-referencing by name of section
  1410. gettitlestring.sty 2010/12/03 v1.4 Cleanup title references (HO)
  1411. opsa_mef.out
  1412. opsa_mef.out
  1413. opsa_logo.pdf Graphic file (type QTm)
  1414. umsa.fd 2013/01/14 v3.01 AMS symbols A
  1415. umsb.fd 2013/01/14 v3.01 AMS symbols B
  1416. opsa_logo.pdf Graphic file (type QTm)
  1417. eu1lmtt.fd 2009/10/30 v1.6 Font defs for Latin Modern
  1418. architecture.pdf Graphic file (type QTm)
  1419. anatomy.pdf Graphic file (type QTm)
  1420. fault_tree.pdf Graphic file (type QTm)
  1421. fault_tree_with_components.pdf Graphic file (type QTm)
  1422. periodic_test.png Graphic file (type QTm)
  1423. multi_phase_markov_graph.png Graphic file (type QTm)
  1424. lambda_histogram.pdf Graphic file (type QTm)
  1425. small_event_tree.pdf Graphic file (type QTm)
  1426. event_tree_structure.pdf Graphic file (type QTm)
  1427. containers_and_constructs.pdf Graphic file (type QTm)
  1428. ***********
  1429.  
  1430. Package atveryend Info: Empty hook `AtEndAfterFileList' on input line 5433.
  1431. )
  1432. Here is how much of TeX's memory you used:
  1433. 25370 strings out of 495579
  1434. 442965 string characters out of 6187322
  1435. 801314 words of memory out of 5000000
  1436. 28316 multiletter control sequences out of 15000+600000
  1437. 11492 words of font info for 75 fonts, out of 8000000 for 9000
  1438. 15 hyphenation exceptions out of 8191
  1439. 54i,18n,49p,10417b,467s stack positions out of 5000i,500n,10000p,200000b,80000s
  1440.  
  1441. Output written on opsa_mef.pdf (100 pages).
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