{
    "_id" : ObjectId("54ec9cac83a214491d2110f4"),
    "name" : "my_images",
    "images" : [
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2311026b0cb289ed04188"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:20:16.961Z"),
        },
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2314a26b0cb289ed04189"),
            "deleted" : ISODate("2015-02-24T15:38:14.826Z"),
            "date_added" : ISODate("2015-02-28T21:21:14.910Z"),
        },
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2315526b0cb289ed0418a"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:21:25.042Z"),
        },
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2315d26b0cb289ed0418b"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:21:33.081Z"),
        }
    ]
}

{
    "_id" : ObjectId("54ec9cac83a214491d2110f4"),
    "name" : "my_images",
    "images" : [
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2311026b0cb289ed04188"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:20:16.961Z"),
        },
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2315526b0cb289ed0418a"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:21:25.042Z"),
        },
        {
            "ext" : "jpeg",
            "type" : "image/jpeg",
            "_id" : ObjectId("54f2315d26b0cb289ed0418b"),
            "deleted" : null,
            "date_added" : ISODate("2015-02-28T21:21:33.081Z"),
        }
    ]
}

Collection.aggregate([
        { $match:
            { _id: ObjectID(collection_id) }
        },
        { $unwind: "$images" },
        { $match:
            { "images.deleted": null }
        }

        // Next step in the pipeline to
        // reconfigure into one document
        // goes here

    ], function (err, result) {
    if (err) {
        console.log(err);
        return;
    }
    console.log(result);
});