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NoClassDefFoundError /org/jaxen/JaxenException

maany
Jun 14th, 2016
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  1. INFO: Deployment of web application archive /var/lib/tomcat7/webapps/openmrs.war has finished in 25,388 ms
  2. Jun 14, 2016 11:49:32 PM org.apache.catalina.startup.HostConfig deployDirectory
  3. INFO: Deploying web application directory /var/lib/tomcat7/webapps/ROOT
  4. Jun 14, 2016 11:49:32 PM org.apache.catalina.core.StandardContext setPath
  5. WARNING: A context path must either be an empty string or start with a '/' and do not end with a '/'. The path [/] does not meet these criteria and has been changed to []
  6. Jun 14, 2016 11:49:32 PM org.apache.catalina.startup.TldConfig execute
  7. INFO: At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
  8. Jun 14, 2016 11:49:32 PM org.apache.catalina.startup.HostConfig deployDirectory
  9. INFO: Deployment of web application directory /var/lib/tomcat7/webapps/ROOT has finished in 172 ms
  10. Jun 14, 2016 11:49:32 PM org.apache.coyote.AbstractProtocol start
  11. INFO: Starting ProtocolHandler ["http-bio-8080"]
  12. Jun 14, 2016 11:49:32 PM org.apache.catalina.startup.Catalina start
  13. INFO: Server startup in 27289 ms
  14. Jun 15, 2016 12:00:56 AM org.apache.jasper.compiler.TldLocationsCache tldScanJar
  15. INFO: At least one JAR was scanned for TLDs yet contained no TLDs. Enable debug logging for this logger for a complete list of JARs that were scanned but no TLDs were found in them. Skipping unneeded JARs during scanning can improve startup time and JSP compilation time.
  16. ************ Handler Name : MRRTTemplateHandler
  17. ********* Check Null RAD-MRRT
  18. ERROR - ExceptionHandlingInterceptor.handleException(73) |2016-06-15 00:01:02,320| Failure during REST processing
  19. ca.uhn.fhir.rest.server.exceptions.InternalErrorException: Failed to call access method
  20.         at ca.uhn.fhir.rest.method.BaseMethodBinding.invokeServerMethod(BaseMethodBinding.java:275)
  21.         at ca.uhn.fhir.rest.method.ReadMethodBinding.invokeServer(ReadMethodBinding.java:207)
  22.         at ca.uhn.fhir.rest.method.ReadMethodBinding.invokeServer(ReadMethodBinding.java:58)
  23.         at ca.uhn.fhir.rest.method.BaseResourceReturningMethodBinding.invokeServer(BaseResourceReturningMethodBinding.java:268)
  24.         at ca.uhn.fhir.rest.method.ReadMethodBinding.invokeServer(ReadMethodBinding.java:58)
  25.         at ca.uhn.fhir.rest.server.RestfulServer.handleRequest(RestfulServer.java:708)
  26.         at ca.uhn.fhir.rest.server.RestfulServer.doGet(RestfulServer.java:155)
  27.         at javax.servlet.http.HttpServlet.service(HttpServlet.java:624)
  28.         at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  29.         at org.openmrs.module.web.ModuleServlet.service(ModuleServlet.java:70)
  30.         at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
  31.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
  32.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  33.         at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
  34.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  35.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  36.         at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:101)
  37.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  38.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  39.         at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:101)
  40.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  41.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  42.         at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:748)
  43.         at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:486)
  44.         at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:411)
  45.         at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:338)
  46.         at org.openmrs.module.fhir.filter.ForwardingFilter.doFilter(ForwardingFilter.java:41)
  47.         at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:70)
  48.         at org.openmrs.module.fhir.filter.AuthorizationFilter.doFilter(AuthorizationFilter.java:105)
  49.         at org.openmrs.module.web.filter.ModuleFilterChain.doFilter(ModuleFilterChain.java:70)
  50.         at org.openmrs.module.web.filter.ModuleFilter.doFilter(ModuleFilter.java:54)
  51.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  52.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  53.         at org.openmrs.web.filter.OpenmrsFilter.doFilterInternal(OpenmrsFilter.java:109)
  54.         at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  55.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  56.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  57.         at org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:230)
  58.         at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  59.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  60.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  61.         at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:105)
  62.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  63.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  64.         at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:105)
  65.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  66.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  67.         at org.openmrs.web.filter.StartupFilter.doFilter(StartupFilter.java:105)
  68.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  69.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  70.         at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
  71.         at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:107)
  72.         at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
  73.         at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
  74.         at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220)
  75.         at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
  76.         at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
  77.         at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:170)
  78.         at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
  79.         at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:956)
  80.         at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
  81.         at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:423)
  82.         at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1079)
  83.         at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:625)
  84.         at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:318)
  85.         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
  86.         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
  87.         at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
  88.         at java.lang.Thread.run(Thread.java:745)
  89. Caused by: java.lang.reflect.InvocationTargetException
  90.         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  91.         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
  92.         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  93.         at java.lang.reflect.Method.invoke(Method.java:606)
  94.         at ca.uhn.fhir.rest.method.BaseMethodBinding.invokeServerMethod(BaseMethodBinding.java:270)
  95.         ... 68 more
  96. Caused by: java.lang.NoClassDefFoundError: org/jaxen/JaxenException
  97.         at org.dom4j.DocumentFactory.createXPath(DocumentFactory.java:230)
  98.         at org.dom4j.tree.AbstractNode.createXPath(AbstractNode.java:207)
  99.         at org.dom4j.tree.AbstractNode.selectSingleNode(AbstractNode.java:183)
  100.         at org.openmrs.module.radiologyfhirsupport.api.util.XPathMapper.unCommentAndPushTemplateAttributes(XPathMapper.java:87)
  101.         at org.openmrs.module.radiologyfhirsupport.api.util.XPathMapper.loadDomFromXml(XPathMapper.java:83)
  102.         at org.openmrs.module.radiologyfhirsupport.api.util.XPathMapper.parseXMLAndMapFields(XPathMapper.java:37)
  103.         at org.openmrs.module.radiologyfhirsupport.api.util.XPathMapper.getDiagnosticReport(XPathMapper.java:26)
  104.         at org.openmrs.module.radiologyfhirsupport.api.impl.MRRTToFHIRServiceImpl.convertMRRTToFHIRViaXPath(MRRTToFHIRServiceImpl.java:39)
  105.         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  106.         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
  107.         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  108.         at java.lang.reflect.Method.invoke(Method.java:606)
  109.         at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  110.         at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
  111.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
  112.         at org.openmrs.aop.LoggingAdvice.invoke(LoggingAdvice.java:121)
  113.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  114.         at org.springframework.aop.framework.adapter.MethodBeforeAdviceInterceptor.invoke(MethodBeforeAdviceInterceptor.java:51)
  115.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  116.         at org.springframework.aop.framework.adapter.MethodBeforeAdviceInterceptor.invoke(MethodBeforeAdviceInterceptor.java:51)
  117.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  118.         at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
  119.         at com.sun.proxy.$Proxy191.convertMRRTToFHIRViaXPath(Unknown Source)
  120.         at org.openmrs.module.radiologyfhirsupport.api.handler.MRRTTemplateHandler.getFHIRDiagnosticReportById(MRRTTemplateHandler.java:36)
  121.         at org.openmrs.module.fhir.api.util.FHIRDiagnosticReportUtil.getFHIRDiagnosticReport(FHIRDiagnosticReportUtil.java:36)
  122.         at org.openmrs.module.fhir.api.impl.DiagnosticReportServiceImpl.getDiagnosticReport(DiagnosticReportServiceImpl.java:69)
  123.         at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
  124.         at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
  125.         at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
  126.         at java.lang.reflect.Method.invoke(Method.java:606)
  127.         at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:317)
  128.         at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
  129.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
  130.         at org.openmrs.aop.LoggingAdvice.invoke(LoggingAdvice.java:121)
  131.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  132.         at org.springframework.aop.framework.adapter.MethodBeforeAdviceInterceptor.invoke(MethodBeforeAdviceInterceptor.java:51)
  133.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  134.         at org.springframework.aop.framework.adapter.MethodBeforeAdviceInterceptor.invoke(MethodBeforeAdviceInterceptor.java:51)
  135.         at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
  136.         at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
  137.         at com.sun.proxy.$Proxy188.getDiagnosticReport(Unknown Source)
  138.         at org.openmrs.module.fhir.resources.FHIRDiagnosticReportResource.getByUniqueId(FHIRDiagnosticReportResource.java:31)
  139.         at org.openmrs.module.fhir.providers.RestfulDiagnosticReportResourceProvider.getResourceById(RestfulDiagnosticReportResourceProvider.java:81)
  140.         ... 73 more
  141. Caused by: java.lang.ClassNotFoundException: org.jaxen.JaxenException
  142.         at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1858)
  143.         at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1709)
  144.         ... 116 more
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