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Aceofspades25

Alphoid sequences - Chr2

Oct 1st, 2015
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  1. >SetA1 - 66.7 Consensus pattern (169 bp):
  2. ATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACA
  3. GAGTTGAA--TTTCTTTTGATTGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAG
  4. TGGACATTTG-GAGTGCTTTGAGGCCTATGGT-GGAAAAGGAAATATCTTCAC
  5. >SetB1 - 49.3 Consensus pattern (172 bp):
  6. ATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATTCAACTCACA
  7. GAGTTGAACATTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAG
  8. TGGACATTTG-GAGCGCTTTGAGGCCTATCGTTGGAAAAGGAAATATCTTCAC
  9. >SetC1 - 52.6 Consensus pattern (171 bp):
  10. ATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGTATTCAACTCACA
  11. GAGTTGAACCTTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAG
  12. TGGATATTTG-GTGCGCTTTGAGGCCTATGGT-GAAAAAGGAAATATCTTCAC
  13. >SetC2 - 26.3 (Had to invert) Consensus pattern (172 bp):
  14. ATAAAAACTAGACAGAAGCATTCTGAGAAACTTCTTTGTGATGTGTGCATTCATCTCACA
  15. GAGTTGAACCTTTCTTTTGATTGAGCAGTTTGGAAACAGTCTTTTTGTAGAATCTGCAAA
  16. GGGATATTTGTGAGCGCTTTGAGGCCTATGGT-GAAAAAGGAAATATCTTCAC
  17. >Consensus
  18. ATAAAAACTAGACAGAAGCATTCTCAGAAACTTCTTTGTGATGTGTGCATTCAACTCACA
  19. GAGTTGAACNTTTCTTTTGATAGAGCAGTTTTGAAACACTCTTTTTGTAGAATCTGCAAG
  20. TGGATATTTG-GAGCGCTTTGAGGCCTATGGT-GGAAAAGGAAATATCTTCAC
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