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  1. $ cmake -DPythonModular=ON -DCMAKE_INSTALL_PREFIX:PATH=$PREFIX -DCMAKE_FIND_ROOT_PATH=$PREFIX -DCMAKE_C_COMPILER=$PREFIX/bin/gcc -DPYTHON_EXECUTABLE=$PREFIX/bin/python3.3m -DPYTHON_LIBRARY=$PREFIX/lib/libpython3.3m.so ..
  2. -- The C compiler identification is GNU 4.8.2
  3. -- The CXX compiler identification is GNU 4.8.2
  4. -- Check for working C compiler: /TL/stat_learn/work/ajalali/opt/bin/gcc
  5. -- Check for working C compiler: /TL/stat_learn/work/ajalali/opt/bin/gcc -- works
  6. -- Detecting C compiler ABI info
  7. -- Detecting C compiler ABI info - done
  8. -- Check for working CXX compiler: /TL/stat_learn/work/ajalali/opt/bin/c++
  9. -- Check for working CXX compiler: /TL/stat_learn/work/ajalali/opt/bin/c++ -- works
  10. -- Detecting CXX compiler ABI info
  11. -- Detecting CXX compiler ABI info - done
  12. -- Found CCache: /usr/bin/ccache
  13. -- Found SWIG: /TL/stat_learn/work/ajalali/opt/bin/swig (found suitable version "2.0.11", minimum required is "2.0.4")
  14. -- Performing Test _HAS_CXX11_FLAG
  15. -- Performing Test _HAS_CXX11_FLAG - Success
  16. -- Checking C++11 support for "__func__"
  17. -- Checking C++11 support for "__func__": works
  18. -- Checking C++11 support for "atomic"
  19. -- Checking C++11 support for "atomic": works
  20. -- Checking C++11 support for "auto"
  21. -- Checking C++11 support for "auto": works
  22. -- Checking C++11 support for "auto_ret_type"
  23. -- Checking C++11 support for "auto_ret_type": works
  24. -- Checking C++11 support for "class_override_final"
  25. -- Checking C++11 support for "class_override_final": not supported
  26. -- Checking C++11 support for "constexpr"
  27. -- Checking C++11 support for "constexpr": works
  28. -- Checking C++11 support for "cstdint"
  29. -- Checking C++11 support for "cstdint": works
  30. -- Checking C++11 support for "decltype"
  31. -- Checking C++11 support for "decltype": works
  32. -- Checking C++11 support for "initializer_list"
  33. -- Checking C++11 support for "initializer_list": works
  34. -- Checking C++11 support for "lambda"
  35. -- Checking C++11 support for "lambda": works
  36. -- Checking C++11 support for "long_long"
  37. -- Checking C++11 support for "long_long": works
  38. -- Checking C++11 support for "nullptr"
  39. -- Checking C++11 support for "nullptr": works
  40. -- Checking C++11 support for "regex"
  41. -- Checking C++11 support for "regex": not supported
  42. -- Checking C++11 support for "rvalue-references"
  43. -- Checking C++11 support for "rvalue-references": works
  44. -- Checking C++11 support for "sizeof_member"
  45. -- Checking C++11 support for "sizeof_member": works
  46. -- Checking C++11 support for "static_assert"
  47. -- Checking C++11 support for "static_assert": works
  48. -- Checking C++11 support for "variadic_templates"
  49. -- Checking C++11 support for "variadic_templates": works
  50. -- Using system's malloc
  51. -- Looking for log2
  52. -- Looking for log2 - found
  53. -- Looking for powl
  54. -- Looking for powl - found
  55. -- Looking for lgammal
  56. -- Looking for lgammal - found
  57. -- Looking for sqrtl
  58. -- Looking for sqrtl - found
  59. -- Looking for xmmintrin.h
  60. -- Looking for xmmintrin.h - found
  61. -- Looking for emmintrin.h
  62. -- Looking for emmintrin.h - found
  63. -- Found GDB: /usr/bin/gdb
  64. -- Could NOT find MOSEK (missing: MOSEK_DIR MOSEK_INCLUDE_DIR MOSEK_LIBRARY)
  65. -- Looking for include file pthread.h
  66. -- Looking for include file pthread.h - found
  67. -- Looking for pthread_create
  68. -- Looking for pthread_create - not found
  69. -- Looking for pthread_create in pthreads
  70. -- Looking for pthread_create in pthreads - not found
  71. -- Looking for pthread_create in pthread
  72. -- Looking for pthread_create in pthread - found
  73. -- Found Threads: TRUE
  74. -- Try OpenMP C flag = [-fopenmp]
  75. -- Performing Test OpenMP_FLAG_DETECTED
  76. -- Performing Test OpenMP_FLAG_DETECTED - Success
  77. -- Try OpenMP CXX flag = [-fopenmp]
  78. -- Performing Test OpenMP_FLAG_DETECTED
  79. -- Performing Test OpenMP_FLAG_DETECTED - Success
  80. -- Found OpenMP: -fopenmp
  81. -- Found PkgConfig: /TL/stat_learn/work/ajalali/opt/bin/pkg-config (found version "0.28")
  82. -- Looking for dgemm_
  83. -- Looking for dgemm_ - found
  84. -- A library with BLAS API found.
  85. -- Looking for cheev_
  86. -- Looking for cheev_ - found
  87. -- A library with LAPACK API found.
  88. -- Looking for clapack_dpotrf in /usr/lib/liblapack_atlas.so
  89. -- Looking for clapack_dpotrf in /usr/lib/liblapack_atlas.so - found
  90. -- Found ATLAS: /usr/lib/liblapack_atlas.so;/usr/lib/libcblas.so;/usr/lib/atlas-base/libf77blas.so;/usr/lib/libatlas.so;/usr/lib/liblapack.so
  91. -- Found GLPK: /usr/lib/libglpk.so
  92. -- Could NOT find CPLEX (missing: CPLEX_LIBRARY CPLEX_INCLUDE_DIR)
  93. -- Could NOT find Eigen3 (missing: EIGEN_INCLUDE_DIR) (Required is at least version "3.1.2")
  94. -- checking for one of the modules 'libColPack>=1.0.9;ColPack>=1.0.9'
  95. -- Could NOT find NLOPT (missing: NLOPT_LIBRARY NLOPT_INCLUDE_DIR)
  96. -- Could NOT find LPSOLVE (missing: LPSOLVE_LIBRARIES LPSOLVE_INCLUDE_DIR)
  97. -- Could NOT find ColPack (missing: COLPACK_LIBRARIES COLPACK_LIBRARY_DIR COLPACK_INCLUDE_DIR)
  98. -- Could NOT find ARPREC (missing: ARPREC_LIBRARIES ARPREC_INCLUDE_DIR)
  99. -- Found Doxygen: /usr/bin/doxygen (found version "1.7.1")
  100. -- Found PythonInterp: /TL/stat_learn/work/ajalali/opt/bin/python3.3m (found version "3.3.3")
  101. -- checking for one of the modules 'libjson>=0.11;json>=0.11;json-c>=0.11'
  102. -- Found LibXml2: /usr/lib/libxml2.so (found version "2.7.8")
  103. -- Found HDF5: /usr/lib/libhdf5.so
  104. -- Found CURL: /usr/lib/libcurl.so (found version "7.21.0")
  105. -- Found ZLIB: /usr/lib/libz.so (found version "1.2.3.4")
  106. -- Found BZip2: /usr/lib/libbz2.so (found version "1.0.5")
  107. -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so
  108. -- Looking for BZ2_bzCompressInit in /usr/lib/libbz2.so - found
  109. -- Could NOT find LibLZMA (missing: LIBLZMA_INCLUDE_DIR LIBLZMA_LIBRARY LIBLZMA_HAS_AUTO_DECODER LIBLZMA_HAS_EASY_ENCODER LIBLZMA_HAS_LZMA_PRESET)
  110. -- Could NOT find SNAPPY (missing: SNAPPY_LIBRARIES SNAPPY_INCLUDE_DIR)
  111. -- Lzo includes and libraries NOT found.
  112. -- Spinlock support found
  113. -- Found PythonLibs: /TL/stat_learn/work/ajalali/opt/lib/libpython3.3m.so (found version "3.3.3")
  114. -- Found NumPy: version "1.8.0" /TL/stat_learn/work/ajalali/opt/lib/python3.3/site-packages/numpy-1.8.0-py3.3-linux-x86_64.egg/numpy/core/include
  115. -- ===================================================================================================================
  116. -- Summary of Configuration Variables
  117. --
  118. -- The following OPTIONAL packages have been found:
  119.  
  120. * CCache
  121. * GDB
  122. * OpenMP
  123. * BLAS
  124. * Threads
  125. * LAPACK
  126. * Atlas
  127. * GLPK
  128. * Doxygen
  129. * LibXml2
  130. * HDF5
  131. * CURL
  132. * ZLIB
  133. * BZip2
  134. * Spinlock
  135.  
  136. -- The following REQUIRED packages have been found:
  137.  
  138. * SWIG (required version >= 2.0.4)
  139. * PythonLibs
  140. * PythonInterp
  141. * NumPy
  142.  
  143. -- The following OPTIONAL packages have not been found:
  144.  
  145. * Mosek
  146. * CPLEX
  147. * ARPACK
  148. * Eigen3 (required version >= 3.1.2)
  149. * NLopt
  150. * LpSolve
  151. * ColPack
  152. * ARPREC
  153. * LibLZMA
  154. * SNAPPY
  155. * LZO
  156.  
  157. -- ===================================================================================================================
  158. -- Enabled Interfaces
  159. -- libshogun is ON
  160. -- python modular is ON
  161. -- octave modular is OFF - enable with -DOctaveModular=ON
  162. -- java modular is OFF - enable with -DJavaModular=ON
  163. -- perl modular is OFF - enable with -DPerlModular=ON
  164. -- ruby modular is OFF - enable with -DRubyModular=ON
  165. -- csharp modular is OFF - enable with -DCSharpModular=ON
  166. -- R modular is OFF - enable with -DRModular=ON
  167. -- lua modular is OFF - enable with -DLuaModular=ON
  168. --
  169. -- Enabled legacy interfaces
  170. -- cmdline static is OFF - enable with -DCmdLineStatic=ON
  171. -- python static is OFF - enable with -DPythonStatic=ON
  172. -- octave static is OFF - enable with -DOctaveStatic=ON
  173. -- matlab static is OFF - enable with -DMatlabStatic=ON
  174. -- R static is OFF - enable with -DRStatic=ON
  175. -- ===================================================================================================================
  176. -- To compile shogun type
  177. -- make
  178. --
  179. -- To install shogun to /TL/stat_learn/work/ajalali/opt type
  180. -- make install
  181. --
  182. -- or to install to a custom directory
  183. -- make install DESTDIR=/my/special/path
  184. -- (or rerun cmake with -DCMAKE_INSTALL_PREFIX=/my/special/path) to just change the prefix
  185. -- ===================================================================================================================
  186. -- Configuring done
  187. -- Generating done
  188. -- Build files have been written to: /TL/stat_learn/work/ajalali/custom_packages/shogun-3.0.0/build
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