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- <?xml version="1.0" encoding="UTF-8"?>
- <!-- Created by XMLPrettyPrinter on 1/30/2015 from -->
- <sbml xmlns = "http://www.sbml.org/sbml/level2/version4" level = "2" version = "4">
- <model id = "cell">
- <listOfCompartments>
- <compartment id = "compartment" size = "1"/>
- </listOfCompartments>
- <listOfSpecies>
- <species id = "X" boundaryCondition = "true" initialConcentration = "0" compartment = "compartment"/>
- <species id = "w" boundaryCondition = "true" initialConcentration = "0" compartment = "compartment"/>
- <species id = "R1" boundaryCondition = "false" initialConcentration = "9.93562993988549" compartment = "compartment"/>
- <species id = "EP" boundaryCondition = "false" initialConcentration = "18.3818606237075" compartment = "compartment"/>
- <species id = "E" boundaryCondition = "false" initialConcentration = "1.61813937629253" compartment = "compartment"/>
- </listOfSpecies>
- <listOfParameters>
- <parameter id = "k1" value = "1.6"/>
- <parameter id = "k2" value = "4"/>
- <parameter id = "Signal" value = "0.1"/>
- <parameter id = "k3" value = "3"/>
- <parameter id = "Vm1" value = "12"/>
- <parameter id = "Km" value = "0.6"/>
- <parameter id = "Vm2" value = "6"/>
- </listOfParameters>
- <listOfReactions>
- <reaction id = "_J1" reversible = "false">
- <listOfReactants>
- <speciesReference species = "X" stoichiometry = "1"/>
- </listOfReactants>
- <listOfProducts>
- <speciesReference species = "R1" stoichiometry = "1"/>
- </listOfProducts>
- <listOfModifiers>
- <modifierSpeciesReference species = "EP"/>
- </listOfModifiers>
- <kineticLaw>
- <math xmlns = "http://www.w3.org/1998/Math/MathML">
- <apply>
- <plus/>
- <apply>
- <times/>
- <ci>
- k1
- </ci>
- <ci>
- EP
- </ci>
- </apply>
- <apply>
- <times/>
- <ci>
- k2
- </ci>
- <ci>
- Signal
- </ci>
- </apply>
- </apply>
- </math>
- </kineticLaw>
- </reaction>
- <reaction id = "_J2" reversible = "false">
- <listOfReactants>
- <speciesReference species = "R1" stoichiometry = "1"/>
- </listOfReactants>
- <listOfProducts>
- <speciesReference species = "w" stoichiometry = "1"/>
- </listOfProducts>
- <kineticLaw>
- <math xmlns = "http://www.w3.org/1998/Math/MathML">
- <apply>
- <times/>
- <ci>
- k3
- </ci>
- <ci>
- R1
- </ci>
- </apply>
- </math>
- </kineticLaw>
- </reaction>
- <reaction id = "_J3" reversible = "false">
- <listOfReactants>
- <speciesReference species = "EP" stoichiometry = "1"/>
- </listOfReactants>
- <listOfProducts>
- <speciesReference species = "E" stoichiometry = "1"/>
- </listOfProducts>
- <kineticLaw>
- <math xmlns = "http://www.w3.org/1998/Math/MathML">
- <apply>
- <divide/>
- <apply>
- <times/>
- <ci>
- Vm1
- </ci>
- <ci>
- EP
- </ci>
- </apply>
- <apply>
- <plus/>
- <ci>
- Km
- </ci>
- <ci>
- EP
- </ci>
- </apply>
- </apply>
- </math>
- </kineticLaw>
- </reaction>
- <reaction id = "_J4" reversible = "false">
- <listOfReactants>
- <speciesReference species = "E" stoichiometry = "1"/>
- </listOfReactants>
- <listOfProducts>
- <speciesReference species = "EP" stoichiometry = "1"/>
- </listOfProducts>
- <listOfModifiers>
- <modifierSpeciesReference species = "R1"/>
- </listOfModifiers>
- <kineticLaw>
- <math xmlns = "http://www.w3.org/1998/Math/MathML">
- <apply>
- <divide/>
- <apply>
- <times/>
- <apply>
- <plus/>
- <ci>
- Vm2
- </ci>
- <ci>
- R1
- </ci>
- </apply>
- <ci>
- E
- </ci>
- </apply>
- <apply>
- <plus/>
- <ci>
- Km
- </ci>
- <ci>
- E
- </ci>
- </apply>
- </apply>
- </math>
- </kineticLaw>
- </reaction>
- </listOfReactions>
- </model>
- </sbml>
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