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  1. BioC_mirror: https://bioconductor.org
  2. Using Bioconductor 3.2 (BiocInstaller 1.20.1), R 3.2.3 (2015-12-10).
  3. Installing package(s) ‘flowWorkspace’
  4. trying URL 'https://bioconductor.org/packages/3.2/bioc/src/contrib/flowWorkspace_3.16.9.tar.gz'
  5. Content type 'application/x-gzip' length 17766389 bytes (16.9 MB)
  6. ==================================================
  7. downloaded 16.9 MB
  8.  
  9. * installing *source* package ‘flowWorkspace’ ...
  10. checking whether the C++ compiler works... yes
  11. checking for C++ compiler default output file name... a.out
  12. checking for suffix of executables...
  13. checking whether we are cross compiling... no
  14. checking for suffix of object files... o
  15. checking whether we are using the GNU C++ compiler... yes
  16. checking whether g++ accepts -g... yes
  17. checking for gcc... gcc
  18. checking whether we are using the GNU C compiler... yes
  19. checking whether gcc accepts -g... yes
  20. checking for gcc option to accept ISO C89... none needed
  21. configure: setting xml2 flags...
  22. configure: No directory was specified for --with-xml2. Trying to find xml2 using other methods.
  23. checking for xml2-config... /usr/bin/xml2-config
  24. configure: setting protobuf flags...
  25. configure: No directory was specified for --with-protobuf. Using bundled protocol buffer.
  26. found protobuf-2.6.0 header sources and tar archive;using what is there.
  27. libtoolize: putting auxiliary files in '.'.
  28. libtoolize: copying file './ltmain.sh'
  29. libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
  30. libtoolize: copying file 'm4/libtool.m4'
  31. libtoolize: copying file 'm4/ltoptions.m4'
  32. libtoolize: copying file 'm4/ltsugar.m4'
  33. libtoolize: copying file 'm4/ltversion.m4'
  34. libtoolize: copying file 'm4/lt~obsolete.m4'
  35. Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/\${ <-- HERE ([^ \t=:+{}]+)}/ at /usr/bin/automake line 3936.
  36. configure.ac:45: installing './compile'
  37. configure.ac:32: installing './missing'
  38. /usr/share/automake-1.15/am/ltlibrary.am: warning: 'libprotobuf.la': linking libtool libraries using a non-POSIX
  39. /usr/share/automake-1.15/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac'
  40. src/Makefile.am:81: while processing Libtool library 'libprotobuf.la'
  41. src/Makefile.am: installing './depcomp'
  42. Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/\${ <-- HERE ([^ \t=:+{}]+)}/ at /usr/bin/automake line 3936.
  43. building protobuf...
  44. found pb_build ;using what is there.
  45. checking whether to enable maintainer-specific portions of Makefiles... yes
  46. checking build system type... x86_64-unknown-linux-gnu
  47. checking host system type... x86_64-unknown-linux-gnu
  48. checking target system type... x86_64-unknown-linux-gnu
  49. checking for a BSD-compatible install... /usr/bin/install -c
  50. checking whether build environment is sane... yes
  51. checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
  52. checking for gawk... gawk
  53. checking whether make sets $(MAKE)... yes
  54. checking whether make supports nested variables... yes
  55. checking for gcc... gcc
  56. checking whether the C compiler works... yes
  57. checking for C compiler default output file name... a.out
  58. checking for suffix of executables...
  59. checking whether we are cross compiling... no
  60. checking for suffix of object files... o
  61. checking whether we are using the GNU C compiler... yes
  62. checking whether gcc accepts -g... yes
  63. checking for gcc option to accept ISO C89... none needed
  64. checking whether gcc understands -c and -o together... yes
  65. checking for style of include used by make... GNU
  66. checking dependency style of gcc... gcc3
  67. checking whether we are using the GNU C++ compiler... yes
  68. checking whether g++ accepts -g... yes
  69. checking dependency style of g++... gcc3
  70. checking how to run the C++ preprocessor... g++ -E
  71. checking for grep that handles long lines and -e... /usr/bin/grep
  72. checking for egrep... /usr/bin/grep -E
  73. checking for ANSI C header files... yes
  74. checking for sys/types.h... yes
  75. checking for sys/stat.h... yes
  76. checking for stdlib.h... yes
  77. checking for string.h... yes
  78. checking for memory.h... yes
  79. checking for strings.h... yes
  80. checking for inttypes.h... yes
  81. checking for stdint.h... yes
  82. checking for unistd.h... yes
  83. checking minix/config.h usability... no
  84. checking minix/config.h presence... no
  85. checking for minix/config.h... no
  86. checking whether it is safe to define __EXTENSIONS__... yes
  87. checking C++ compiler flags...... use user-supplied: -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong
  88. checking whether __SUNPRO_CC is declared... no
  89. checking how to print strings... printf
  90. checking for a sed that does not truncate output... /usr/bin/sed
  91. checking for fgrep... /usr/bin/grep -F
  92. checking for ld used by gcc... /usr/bin/ld
  93. checking if the linker (/usr/bin/ld) is GNU ld... yes
  94. checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
  95. checking the name lister (/usr/bin/nm -B) interface... BSD nm
  96. checking whether ln -s works... yes
  97. checking the maximum length of command line arguments... 1572864
  98. checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
  99. checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
  100. checking for /usr/bin/ld option to reload object files... -r
  101. checking for objdump... objdump
  102. checking how to recognize dependent libraries... pass_all
  103. checking for dlltool... no
  104. checking how to associate runtime and link libraries... printf %s\n
  105. checking for ar... ar
  106. checking for archiver @FILE support... @
  107. checking for strip... strip
  108. checking for ranlib... ranlib
  109. checking command to parse /usr/bin/nm -B output from gcc object... ok
  110. checking for sysroot... no
  111. checking for a working dd... /usr/bin/dd
  112. checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
  113. checking for mt... no
  114. checking if : is a manifest tool... no
  115. checking for dlfcn.h... yes
  116. checking for objdir... .libs
  117. checking if gcc supports -fno-rtti -fno-exceptions... no
  118. checking for gcc option to produce PIC... -fPIC -DPIC
  119. checking if gcc PIC flag -fPIC -DPIC works... yes
  120. checking if gcc static flag -static works... yes
  121. checking if gcc supports -c -o file.o... yes
  122. checking if gcc supports -c -o file.o... (cached) yes
  123. checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  124. checking whether -lc should be explicitly linked in... no
  125. checking dynamic linker characteristics... GNU/Linux ld.so
  126. checking how to hardcode library paths into programs... immediate
  127. checking whether stripping libraries is possible... yes
  128. checking if libtool supports shared libraries... yes
  129. checking whether to build shared libraries... yes
  130. checking whether to build static libraries... no
  131. checking how to run the C++ preprocessor... g++ -E
  132. checking for ld used by g++... /usr/bin/ld -m elf_x86_64
  133. checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
  134. checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  135. checking for g++ option to produce PIC... -fPIC -DPIC
  136. checking if g++ PIC flag -fPIC -DPIC works... yes
  137. checking if g++ static flag -static works... yes
  138. checking if g++ supports -c -o file.o... yes
  139. checking if g++ supports -c -o file.o... (cached) yes
  140. checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  141. checking dynamic linker characteristics... (cached) GNU/Linux ld.so
  142. checking how to hardcode library paths into programs... immediate
  143. checking for ANSI C header files... (cached) yes
  144. checking fcntl.h usability... yes
  145. checking fcntl.h presence... yes
  146. checking for fcntl.h... yes
  147. checking for inttypes.h... (cached) yes
  148. checking limits.h usability... yes
  149. checking limits.h presence... yes
  150. checking for limits.h... yes
  151. checking for stdlib.h... (cached) yes
  152. checking for unistd.h... (cached) yes
  153. checking for working memcmp... yes
  154. checking for working strtod... yes
  155. checking for ftruncate... yes
  156. checking for memset... yes
  157. checking for mkdir... yes
  158. checking for strchr... yes
  159. checking for strerror... yes
  160. checking for strtol... yes
  161. checking zlib version... ok (1.2.0.4 or later)
  162. checking for library containing zlibVersion... -lz
  163. checking for the pthreads library -lpthreads... no
  164. checking whether pthreads work without any flags... no
  165. checking whether pthreads work with -Kthread... no
  166. checking whether pthreads work with -kthread... no
  167. checking for the pthreads library -llthread... no
  168. checking whether pthreads work with -pthread... yes
  169. checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
  170. checking if more special flags are required for pthreads... no
  171. checking whether to check for GCC pthread/shared inconsistencies... yes
  172. checking whether -pthread is sufficient with -shared... yes
  173. checking whether what we have so far is sufficient with -nostdlib... no
  174. checking whether -lpthread saves the day... yes
  175. checking the location of hash_map... <tr1/unordered_map>
  176. checking that generated files are newer than configure... done
  177. configure: creating ./config.status
  178. config.status: creating Makefile
  179. config.status: creating src/Makefile
  180. config.status: creating protobuf.pc
  181. config.status: creating protobuf-lite.pc
  182. config.status: creating config.h
  183. config.status: executing depfiles commands
  184. config.status: executing libtool commands
  185. CDPATH="${ZSH_VERSION+.}:" && cd ../protobuf-2.6.0 && /bin/sh /tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/protobuf-2.6.0/missing aclocal-1.15 -I m4
  186. cd ../protobuf-2.6.0 && /bin/sh /tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/protobuf-2.6.0/missing automake-1.15 --foreign
  187. Unescaped left brace in regex is deprecated, passed through in regex; marked by <-- HERE in m/\${ <-- HERE ([^ \t=:+{}]+)}/ at /usr/bin/automake-1.15 line 3936.
  188. CDPATH="${ZSH_VERSION+.}:" && cd ../protobuf-2.6.0 && /bin/sh /tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/protobuf-2.6.0/missing autoconf
  189. /bin/sh ./config.status --recheck
  190. running CONFIG_SHELL=/bin/sh /bin/sh ../protobuf-2.6.0/configure --enable-static=no CXX=g++ CXXFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong CC=gcc CFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong --no-create --no-recursion
  191. checking whether to enable maintainer-specific portions of Makefiles... yes
  192. checking build system type... x86_64-unknown-linux-gnu
  193. checking host system type... x86_64-unknown-linux-gnu
  194. checking target system type... x86_64-unknown-linux-gnu
  195. checking for a BSD-compatible install... /usr/bin/install -c
  196. checking whether build environment is sane... yes
  197. checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
  198. checking for gawk... gawk
  199. checking whether make sets $(MAKE)... yes
  200. checking whether make supports nested variables... yes
  201. checking for gcc... gcc
  202. checking whether the C compiler works... yes
  203. checking for C compiler default output file name... a.out
  204. checking for suffix of executables...
  205. checking whether we are cross compiling... no
  206. checking for suffix of object files... o
  207. checking whether we are using the GNU C compiler... yes
  208. checking whether gcc accepts -g... yes
  209. checking for gcc option to accept ISO C89... none needed
  210. checking whether gcc understands -c and -o together... yes
  211. checking for style of include used by make... GNU
  212. checking dependency style of gcc... gcc3
  213. checking whether we are using the GNU C++ compiler... yes
  214. checking whether g++ accepts -g... yes
  215. checking dependency style of g++... gcc3
  216. checking how to run the C++ preprocessor... g++ -E
  217. checking for grep that handles long lines and -e... /usr/bin/grep
  218. checking for egrep... /usr/bin/grep -E
  219. checking for ANSI C header files... yes
  220. checking for sys/types.h... yes
  221. checking for sys/stat.h... yes
  222. checking for stdlib.h... yes
  223. checking for string.h... yes
  224. checking for memory.h... yes
  225. checking for strings.h... yes
  226. checking for inttypes.h... yes
  227. checking for stdint.h... yes
  228. checking for unistd.h... yes
  229. checking minix/config.h usability... no
  230. checking minix/config.h presence... no
  231. checking for minix/config.h... no
  232. checking whether it is safe to define __EXTENSIONS__... yes
  233. checking C++ compiler flags...... use user-supplied: -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong
  234. checking whether __SUNPRO_CC is declared... no
  235. checking how to print strings... printf
  236. checking for a sed that does not truncate output... /usr/bin/sed
  237. checking for fgrep... /usr/bin/grep -F
  238. checking for ld used by gcc... /usr/bin/ld
  239. checking if the linker (/usr/bin/ld) is GNU ld... yes
  240. checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
  241. checking the name lister (/usr/bin/nm -B) interface... BSD nm
  242. checking whether ln -s works... yes
  243. checking the maximum length of command line arguments... 1572864
  244. checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop
  245. checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop
  246. checking for /usr/bin/ld option to reload object files... -r
  247. checking for objdump... objdump
  248. checking how to recognize dependent libraries... pass_all
  249. checking for dlltool... no
  250. checking how to associate runtime and link libraries... printf %s\n
  251. checking for ar... ar
  252. checking for archiver @FILE support... @
  253. checking for strip... strip
  254. checking for ranlib... ranlib
  255. checking command to parse /usr/bin/nm -B output from gcc object... ok
  256. checking for sysroot... no
  257. checking for a working dd... /usr/bin/dd
  258. checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
  259. checking for mt... no
  260. checking if : is a manifest tool... no
  261. checking for dlfcn.h... yes
  262. checking for objdir... .libs
  263. checking if gcc supports -fno-rtti -fno-exceptions... no
  264. checking for gcc option to produce PIC... -fPIC -DPIC
  265. checking if gcc PIC flag -fPIC -DPIC works... yes
  266. checking if gcc static flag -static works... yes
  267. checking if gcc supports -c -o file.o... yes
  268. checking if gcc supports -c -o file.o... (cached) yes
  269. checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  270. checking whether -lc should be explicitly linked in... no
  271. checking dynamic linker characteristics... GNU/Linux ld.so
  272. checking how to hardcode library paths into programs... immediate
  273. checking whether stripping libraries is possible... yes
  274. checking if libtool supports shared libraries... yes
  275. checking whether to build shared libraries... yes
  276. checking whether to build static libraries... no
  277. checking how to run the C++ preprocessor... g++ -E
  278. checking for ld used by g++... /usr/bin/ld -m elf_x86_64
  279. checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
  280. checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  281. checking for g++ option to produce PIC... -fPIC -DPIC
  282. checking if g++ PIC flag -fPIC -DPIC works... yes
  283. checking if g++ static flag -static works... yes
  284. checking if g++ supports -c -o file.o... yes
  285. checking if g++ supports -c -o file.o... (cached) yes
  286. checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
  287. checking dynamic linker characteristics... (cached) GNU/Linux ld.so
  288. checking how to hardcode library paths into programs... immediate
  289. checking for ANSI C header files... (cached) yes
  290. checking fcntl.h usability... yes
  291. checking fcntl.h presence... yes
  292. checking for fcntl.h... yes
  293. checking for inttypes.h... (cached) yes
  294. checking limits.h usability... yes
  295. checking limits.h presence... yes
  296. checking for limits.h... yes
  297. checking for stdlib.h... (cached) yes
  298. checking for unistd.h... (cached) yes
  299. checking for working memcmp... yes
  300. checking for working strtod... yes
  301. checking for ftruncate... yes
  302. checking for memset... yes
  303. checking for mkdir... yes
  304. checking for strchr... yes
  305. checking for strerror... yes
  306. checking for strtol... yes
  307. checking zlib version... ok (1.2.0.4 or later)
  308. checking for library containing zlibVersion... -lz
  309. checking for the pthreads library -lpthreads... no
  310. checking whether pthreads work without any flags... no
  311. checking whether pthreads work with -Kthread... no
  312. checking whether pthreads work with -kthread... no
  313. checking for the pthreads library -llthread... no
  314. checking whether pthreads work with -pthread... yes
  315. checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE
  316. checking if more special flags are required for pthreads... no
  317. checking whether to check for GCC pthread/shared inconsistencies... yes
  318. checking whether -pthread is sufficient with -shared... yes
  319. checking whether what we have so far is sufficient with -nostdlib... no
  320. checking whether -lpthread saves the day... yes
  321. checking the location of hash_map... <tr1/unordered_map>
  322. checking that generated files are newer than configure... done
  323. configure: creating ./config.status
  324. /bin/sh ./config.status
  325. config.status: creating Makefile
  326. config.status: creating src/Makefile
  327. config.status: creating protobuf.pc
  328. config.status: creating protobuf-lite.pc
  329. config.status: creating config.h
  330. config.status: config.h is unchanged
  331. config.status: executing depfiles commands
  332. config.status: executing libtool commands
  333. (CDPATH="${ZSH_VERSION+.}:" && cd ../protobuf-2.6.0 && /bin/sh /tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/protobuf-2.6.0/missing autoheader)
  334. rm -f stamp-h1
  335. touch ../protobuf-2.6.0/config.h.in
  336. cd . && /bin/sh ./config.status config.h
  337. config.status: creating config.h
  338. config.status: config.h is unchanged
  339. make all-recursive
  340. make[1]: Entering directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build'
  341. Making all in .
  342. make[2]: Entering directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build'
  343. make[2]: Leaving directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build'
  344. Making all in src
  345. make[2]: Entering directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build/src'
  346. depbase=`echo google/protobuf/stubs/atomicops_internals_x86_gcc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  347. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/atomicops_internals_x86_gcc.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/atomicops_internals_x86_gcc.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/atomicops_internals_x86_gcc.cc &&\
  348. mv -f $depbase.Tpo $depbase.Plo
  349. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/atomicops_internals_x86_gcc.lo -MD -MP -MF google/protobuf/stubs/.deps/atomicops_internals_x86_gcc.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/atomicops_internals_x86_gcc.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/atomicops_internals_x86_gcc.o
  350. depbase=`echo google/protobuf/stubs/atomicops_internals_x86_msvc.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  351. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/atomicops_internals_x86_msvc.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/atomicops_internals_x86_msvc.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/atomicops_internals_x86_msvc.cc &&\
  352. mv -f $depbase.Tpo $depbase.Plo
  353. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/atomicops_internals_x86_msvc.lo -MD -MP -MF google/protobuf/stubs/.deps/atomicops_internals_x86_msvc.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/atomicops_internals_x86_msvc.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/atomicops_internals_x86_msvc.o
  354. depbase=`echo google/protobuf/stubs/common.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  355. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/common.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/common.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/common.cc &&\
  356. mv -f $depbase.Tpo $depbase.Plo
  357. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/common.lo -MD -MP -MF google/protobuf/stubs/.deps/common.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/common.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/common.o
  358. depbase=`echo google/protobuf/stubs/once.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  359. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/once.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/once.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/once.cc &&\
  360. mv -f $depbase.Tpo $depbase.Plo
  361. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/once.lo -MD -MP -MF google/protobuf/stubs/.deps/once.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/once.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/once.o
  362. depbase=`echo google/protobuf/stubs/stringprintf.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  363. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/stringprintf.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/stringprintf.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.cc &&\
  364. mv -f $depbase.Tpo $depbase.Plo
  365. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/stringprintf.lo -MD -MP -MF google/protobuf/stubs/.deps/stringprintf.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/stringprintf.o
  366. In file included from ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.h:47:0,
  367. from ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.cc:33:
  368. ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.cc: In function 'std::__cxx11::string google::protobuf::StringPrintfVector(const char*, const std::vector<std::__cxx11::basic_string<char> >&)':
  369. ../../protobuf-2.6.0/src/google/protobuf/stubs/stringprintf.cc:164:59: warning: typedef 'arg_count_mismatch' locally defined but not used [-Wunused-local-typedefs]
  370. GOOGLE_COMPILE_ASSERT(kStringPrintfVectorMaxArgs == 32, arg_count_mismatch);
  371. ^
  372. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  373. msg[bool(expr) ? 1 : -1]
  374. ^
  375. depbase=`echo google/protobuf/extension_set.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  376. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/extension_set.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/extension_set.lo ../../protobuf-2.6.0/src/google/protobuf/extension_set.cc &&\
  377. mv -f $depbase.Tpo $depbase.Plo
  378. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/extension_set.lo -MD -MP -MF google/protobuf/.deps/extension_set.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/extension_set.cc -fPIC -DPIC -o google/protobuf/.libs/extension_set.o
  379. In file included from ../../protobuf-2.6.0/src/google/protobuf/extension_set.cc:43:0:
  380. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDie(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  381. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:356:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  382. typedef typename Collection::value_type value_type;
  383. ^
  384. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDieNoPrint(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  385. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:367:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  386. typedef typename Collection::value_type value_type;
  387. ^
  388. depbase=`echo google/protobuf/generated_message_util.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  389. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/generated_message_util.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/generated_message_util.lo ../../protobuf-2.6.0/src/google/protobuf/generated_message_util.cc &&\
  390. mv -f $depbase.Tpo $depbase.Plo
  391. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/generated_message_util.lo -MD -MP -MF google/protobuf/.deps/generated_message_util.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/generated_message_util.cc -fPIC -DPIC -o google/protobuf/.libs/generated_message_util.o
  392. depbase=`echo google/protobuf/message_lite.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  393. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/message_lite.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/message_lite.lo ../../protobuf-2.6.0/src/google/protobuf/message_lite.cc &&\
  394. mv -f $depbase.Tpo $depbase.Plo
  395. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/message_lite.lo -MD -MP -MF google/protobuf/.deps/message_lite.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/message_lite.cc -fPIC -DPIC -o google/protobuf/.libs/message_lite.o
  396. depbase=`echo google/protobuf/repeated_field.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  397. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/repeated_field.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/repeated_field.lo ../../protobuf-2.6.0/src/google/protobuf/repeated_field.cc &&\
  398. mv -f $depbase.Tpo $depbase.Plo
  399. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/repeated_field.lo -MD -MP -MF google/protobuf/.deps/repeated_field.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/repeated_field.cc -fPIC -DPIC -o google/protobuf/.libs/repeated_field.o
  400. depbase=`echo google/protobuf/wire_format_lite.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  401. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/wire_format_lite.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/wire_format_lite.lo ../../protobuf-2.6.0/src/google/protobuf/wire_format_lite.cc &&\
  402. mv -f $depbase.Tpo $depbase.Plo
  403. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/wire_format_lite.lo -MD -MP -MF google/protobuf/.deps/wire_format_lite.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/wire_format_lite.cc -fPIC -DPIC -o google/protobuf/.libs/wire_format_lite.o
  404. depbase=`echo google/protobuf/io/coded_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  405. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/coded_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/coded_stream.lo ../../protobuf-2.6.0/src/google/protobuf/io/coded_stream.cc &&\
  406. mv -f $depbase.Tpo $depbase.Plo
  407. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/coded_stream.lo -MD -MP -MF google/protobuf/io/.deps/coded_stream.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/coded_stream.cc -fPIC -DPIC -o google/protobuf/io/.libs/coded_stream.o
  408. depbase=`echo google/protobuf/io/zero_copy_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  409. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream.lo ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream.cc &&\
  410. mv -f $depbase.Tpo $depbase.Plo
  411. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream.cc -fPIC -DPIC -o google/protobuf/io/.libs/zero_copy_stream.o
  412. depbase=`echo google/protobuf/io/zero_copy_stream_impl_lite.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  413. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream_impl_lite.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream_impl_lite.lo ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream_impl_lite.cc &&\
  414. mv -f $depbase.Tpo $depbase.Plo
  415. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream_impl_lite.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream_impl_lite.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream_impl_lite.cc -fPIC -DPIC -o google/protobuf/io/.libs/zero_copy_stream_impl_lite.o
  416. depbase=`echo google/protobuf/stubs/strutil.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  417. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/strutil.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/strutil.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc &&\
  418. mv -f $depbase.Tpo $depbase.Plo
  419. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/strutil.lo -MD -MP -MF google/protobuf/stubs/.deps/strutil.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/strutil.o
  420. In file included from ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:38:0,
  421. from ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc:33:
  422. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  423. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  424. sizeof_int64_is_not_sizeof_long_long);
  425. ^
  426. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  427. msg[bool(expr) ? 1 : -1]
  428. ^
  429. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  430. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  431. sizeof_uint64_is_not_sizeof_long_long);
  432. ^
  433. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  434. msg[bool(expr) ? 1 : -1]
  435. ^
  436. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc: In function 'char* google::protobuf::DoubleToBuffer(double, char*)':
  437. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc:1172:39: warning: typedef 'DBL_DIG_is_too_big' locally defined but not used [-Wunused-local-typedefs]
  438. GOOGLE_COMPILE_ASSERT(DBL_DIG < 20, DBL_DIG_is_too_big);
  439. ^
  440. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  441. msg[bool(expr) ? 1 : -1]
  442. ^
  443. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc: In function 'char* google::protobuf::FloatToBuffer(float, char*)':
  444. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.cc:1227:39: warning: typedef 'FLT_DIG_is_too_big' locally defined but not used [-Wunused-local-typedefs]
  445. GOOGLE_COMPILE_ASSERT(FLT_DIG < 10, FLT_DIG_is_too_big);
  446. ^
  447. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  448. msg[bool(expr) ? 1 : -1]
  449. ^
  450. depbase=`echo google/protobuf/stubs/substitute.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  451. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/substitute.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/substitute.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/substitute.cc &&\
  452. mv -f $depbase.Tpo $depbase.Plo
  453. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/substitute.lo -MD -MP -MF google/protobuf/stubs/.deps/substitute.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/substitute.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/substitute.o
  454. In file included from ../../protobuf-2.6.0/src/google/protobuf/stubs/substitute.h:35:0,
  455. from ../../protobuf-2.6.0/src/google/protobuf/stubs/substitute.cc:33:
  456. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  457. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  458. sizeof_int64_is_not_sizeof_long_long);
  459. ^
  460. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  461. msg[bool(expr) ? 1 : -1]
  462. ^
  463. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  464. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  465. sizeof_uint64_is_not_sizeof_long_long);
  466. ^
  467. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  468. msg[bool(expr) ? 1 : -1]
  469. ^
  470. depbase=`echo google/protobuf/stubs/structurally_valid.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  471. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/structurally_valid.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/stubs/structurally_valid.lo ../../protobuf-2.6.0/src/google/protobuf/stubs/structurally_valid.cc &&\
  472. mv -f $depbase.Tpo $depbase.Plo
  473. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/stubs/structurally_valid.lo -MD -MP -MF google/protobuf/stubs/.deps/structurally_valid.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/stubs/structurally_valid.cc -fPIC -DPIC -o google/protobuf/stubs/.libs/structurally_valid.o
  474. depbase=`echo google/protobuf/descriptor.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  475. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor.lo ../../protobuf-2.6.0/src/google/protobuf/descriptor.cc &&\
  476. mv -f $depbase.Tpo $depbase.Plo
  477. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor.lo -MD -MP -MF google/protobuf/.deps/descriptor.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/descriptor.cc -fPIC -DPIC -o google/protobuf/.libs/descriptor.o
  478. In file included from ../../protobuf-2.6.0/src/google/protobuf/stubs/hash.h:39:0,
  479. from ../../protobuf-2.6.0/src/google/protobuf/descriptor.cc:35:
  480. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  481. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  482. sizeof_int64_is_not_sizeof_long_long);
  483. ^
  484. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  485. msg[bool(expr) ? 1 : -1]
  486. ^
  487. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  488. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  489. sizeof_uint64_is_not_sizeof_long_long);
  490. ^
  491. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  492. msg[bool(expr) ? 1 : -1]
  493. ^
  494. In file included from ../../protobuf-2.6.0/src/google/protobuf/descriptor.cc:59:0:
  495. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDie(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  496. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:356:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  497. typedef typename Collection::value_type value_type;
  498. ^
  499. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDieNoPrint(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  500. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:367:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  501. typedef typename Collection::value_type value_type;
  502. ^
  503. depbase=`echo google/protobuf/descriptor.pb.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  504. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor.pb.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor.pb.lo ../../protobuf-2.6.0/src/google/protobuf/descriptor.pb.cc &&\
  505. mv -f $depbase.Tpo $depbase.Plo
  506. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor.pb.lo -MD -MP -MF google/protobuf/.deps/descriptor.pb.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/descriptor.pb.cc -fPIC -DPIC -o google/protobuf/.libs/descriptor.pb.o
  507. depbase=`echo google/protobuf/descriptor_database.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  508. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor_database.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/descriptor_database.lo ../../protobuf-2.6.0/src/google/protobuf/descriptor_database.cc &&\
  509. mv -f $depbase.Tpo $depbase.Plo
  510. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/descriptor_database.lo -MD -MP -MF google/protobuf/.deps/descriptor_database.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/descriptor_database.cc -fPIC -DPIC -o google/protobuf/.libs/descriptor_database.o
  511. In file included from ../../protobuf-2.6.0/src/google/protobuf/descriptor_database.h:44:0,
  512. from ../../protobuf-2.6.0/src/google/protobuf/descriptor_database.cc:35:
  513. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  514. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  515. sizeof_int64_is_not_sizeof_long_long);
  516. ^
  517. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  518. msg[bool(expr) ? 1 : -1]
  519. ^
  520. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  521. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  522. sizeof_uint64_is_not_sizeof_long_long);
  523. ^
  524. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  525. msg[bool(expr) ? 1 : -1]
  526. ^
  527. In file included from ../../protobuf-2.6.0/src/google/protobuf/descriptor_database.cc:43:0:
  528. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDie(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  529. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:356:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  530. typedef typename Collection::value_type value_type;
  531. ^
  532. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDieNoPrint(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  533. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:367:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  534. typedef typename Collection::value_type value_type;
  535. ^
  536. depbase=`echo google/protobuf/dynamic_message.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  537. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/dynamic_message.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/dynamic_message.lo ../../protobuf-2.6.0/src/google/protobuf/dynamic_message.cc &&\
  538. mv -f $depbase.Tpo $depbase.Plo
  539. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/dynamic_message.lo -MD -MP -MF google/protobuf/.deps/dynamic_message.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/dynamic_message.cc -fPIC -DPIC -o google/protobuf/.libs/dynamic_message.o
  540. depbase=`echo google/protobuf/extension_set_heavy.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  541. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/extension_set_heavy.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/extension_set_heavy.lo ../../protobuf-2.6.0/src/google/protobuf/extension_set_heavy.cc &&\
  542. mv -f $depbase.Tpo $depbase.Plo
  543. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/extension_set_heavy.lo -MD -MP -MF google/protobuf/.deps/extension_set_heavy.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/extension_set_heavy.cc -fPIC -DPIC -o google/protobuf/.libs/extension_set_heavy.o
  544. depbase=`echo google/protobuf/generated_message_reflection.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  545. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/generated_message_reflection.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/generated_message_reflection.lo ../../protobuf-2.6.0/src/google/protobuf/generated_message_reflection.cc &&\
  546. mv -f $depbase.Tpo $depbase.Plo
  547. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/generated_message_reflection.lo -MD -MP -MF google/protobuf/.deps/generated_message_reflection.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/generated_message_reflection.cc -fPIC -DPIC -o google/protobuf/.libs/generated_message_reflection.o
  548. ../../protobuf-2.6.0/src/google/protobuf/generated_message_reflection.cc: In member function 'void google::protobuf::internal::GeneratedMessageReflection::SwapOneofField(google::protobuf::Message*, google::protobuf::Message*, const google::protobuf::OneofDescriptor*) const':
  549. ../../protobuf-2.6.0/src/google/protobuf/generated_message_reflection.cc:503:54: warning: 'field1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550. SetField<TYPE>(message2, field1, temp_##TYPE); \
  551. ^
  552. ../../protobuf-2.6.0/src/google/protobuf/generated_message_reflection.cc:516:60: warning: 'temp_message' may be used uninitialized in this function [-Wmaybe-uninitialized]
  553. SetAllocatedMessage(message2, temp_message, field1);
  554. ^
  555. depbase=`echo google/protobuf/message.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  556. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/message.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/message.lo ../../protobuf-2.6.0/src/google/protobuf/message.cc &&\
  557. mv -f $depbase.Tpo $depbase.Plo
  558. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/message.lo -MD -MP -MF google/protobuf/.deps/message.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/message.cc -fPIC -DPIC -o google/protobuf/.libs/message.o
  559. In file included from ../../protobuf-2.6.0/src/google/protobuf/stubs/hash.h:39:0,
  560. from ../../protobuf-2.6.0/src/google/protobuf/message.cc:37:
  561. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  562. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  563. sizeof_int64_is_not_sizeof_long_long);
  564. ^
  565. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  566. msg[bool(expr) ? 1 : -1]
  567. ^
  568. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  569. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  570. sizeof_uint64_is_not_sizeof_long_long);
  571. ^
  572. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  573. msg[bool(expr) ? 1 : -1]
  574. ^
  575. In file included from ../../protobuf-2.6.0/src/google/protobuf/message.cc:51:0:
  576. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDie(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  577. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:356:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  578. typedef typename Collection::value_type value_type;
  579. ^
  580. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDieNoPrint(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  581. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:367:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  582. typedef typename Collection::value_type value_type;
  583. ^
  584. depbase=`echo google/protobuf/reflection_ops.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  585. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/reflection_ops.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/reflection_ops.lo ../../protobuf-2.6.0/src/google/protobuf/reflection_ops.cc &&\
  586. mv -f $depbase.Tpo $depbase.Plo
  587. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/reflection_ops.lo -MD -MP -MF google/protobuf/.deps/reflection_ops.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/reflection_ops.cc -fPIC -DPIC -o google/protobuf/.libs/reflection_ops.o
  588. In file included from ../../protobuf-2.6.0/src/google/protobuf/reflection_ops.h:41:0,
  589. from ../../protobuf-2.6.0/src/google/protobuf/reflection_ops.cc:38:
  590. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  591. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  592. sizeof_int64_is_not_sizeof_long_long);
  593. ^
  594. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  595. msg[bool(expr) ? 1 : -1]
  596. ^
  597. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  598. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  599. sizeof_uint64_is_not_sizeof_long_long);
  600. ^
  601. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  602. msg[bool(expr) ? 1 : -1]
  603. ^
  604. depbase=`echo google/protobuf/service.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  605. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/service.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/service.lo ../../protobuf-2.6.0/src/google/protobuf/service.cc &&\
  606. mv -f $depbase.Tpo $depbase.Plo
  607. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/service.lo -MD -MP -MF google/protobuf/.deps/service.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/service.cc -fPIC -DPIC -o google/protobuf/.libs/service.o
  608. depbase=`echo google/protobuf/text_format.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  609. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/text_format.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/text_format.lo ../../protobuf-2.6.0/src/google/protobuf/text_format.cc &&\
  610. mv -f $depbase.Tpo $depbase.Plo
  611. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/text_format.lo -MD -MP -MF google/protobuf/.deps/text_format.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/text_format.cc -fPIC -DPIC -o google/protobuf/.libs/text_format.o
  612. In file included from ../../protobuf-2.6.0/src/google/protobuf/text_format.h:46:0,
  613. from ../../protobuf-2.6.0/src/google/protobuf/text_format.cc:43:
  614. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  615. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  616. sizeof_int64_is_not_sizeof_long_long);
  617. ^
  618. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  619. msg[bool(expr) ? 1 : -1]
  620. ^
  621. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  622. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  623. sizeof_uint64_is_not_sizeof_long_long);
  624. ^
  625. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  626. msg[bool(expr) ? 1 : -1]
  627. ^
  628. In file included from ../../protobuf-2.6.0/src/google/protobuf/text_format.cc:54:0:
  629. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDie(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  630. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:356:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  631. typedef typename Collection::value_type value_type;
  632. ^
  633. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h: In function 'void google::protobuf::InsertOrDieNoPrint(Collection*, const typename Collection::value_type::first_type&, const typename Collection::value_type::second_type&)':
  634. ../../protobuf-2.6.0/src/google/protobuf/stubs/map_util.h:367:43: warning: typedef 'value_type' locally defined but not used [-Wunused-local-typedefs]
  635. typedef typename Collection::value_type value_type;
  636. ^
  637. depbase=`echo google/protobuf/unknown_field_set.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  638. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/unknown_field_set.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/unknown_field_set.lo ../../protobuf-2.6.0/src/google/protobuf/unknown_field_set.cc &&\
  639. mv -f $depbase.Tpo $depbase.Plo
  640. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/unknown_field_set.lo -MD -MP -MF google/protobuf/.deps/unknown_field_set.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/unknown_field_set.cc -fPIC -DPIC -o google/protobuf/.libs/unknown_field_set.o
  641. depbase=`echo google/protobuf/wire_format.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  642. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/wire_format.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/wire_format.lo ../../protobuf-2.6.0/src/google/protobuf/wire_format.cc &&\
  643. mv -f $depbase.Tpo $depbase.Plo
  644. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/wire_format.lo -MD -MP -MF google/protobuf/.deps/wire_format.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/wire_format.cc -fPIC -DPIC -o google/protobuf/.libs/wire_format.o
  645. depbase=`echo google/protobuf/io/gzip_stream.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  646. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/gzip_stream.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/gzip_stream.lo ../../protobuf-2.6.0/src/google/protobuf/io/gzip_stream.cc &&\
  647. mv -f $depbase.Tpo $depbase.Plo
  648. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/gzip_stream.lo -MD -MP -MF google/protobuf/io/.deps/gzip_stream.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/gzip_stream.cc -fPIC -DPIC -o google/protobuf/io/.libs/gzip_stream.o
  649. depbase=`echo google/protobuf/io/printer.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  650. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/printer.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/printer.lo ../../protobuf-2.6.0/src/google/protobuf/io/printer.cc &&\
  651. mv -f $depbase.Tpo $depbase.Plo
  652. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/printer.lo -MD -MP -MF google/protobuf/io/.deps/printer.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/printer.cc -fPIC -DPIC -o google/protobuf/io/.libs/printer.o
  653. depbase=`echo google/protobuf/io/strtod.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  654. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/strtod.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/strtod.lo ../../protobuf-2.6.0/src/google/protobuf/io/strtod.cc &&\
  655. mv -f $depbase.Tpo $depbase.Plo
  656. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/strtod.lo -MD -MP -MF google/protobuf/io/.deps/strtod.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/strtod.cc -fPIC -DPIC -o google/protobuf/io/.libs/strtod.o
  657. depbase=`echo google/protobuf/io/tokenizer.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  658. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/tokenizer.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/tokenizer.lo ../../protobuf-2.6.0/src/google/protobuf/io/tokenizer.cc &&\
  659. mv -f $depbase.Tpo $depbase.Plo
  660. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/tokenizer.lo -MD -MP -MF google/protobuf/io/.deps/tokenizer.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/tokenizer.cc -fPIC -DPIC -o google/protobuf/io/.libs/tokenizer.o
  661. In file included from ../../protobuf-2.6.0/src/google/protobuf/io/tokenizer.h:42:0,
  662. from ../../protobuf-2.6.0/src/google/protobuf/io/tokenizer.cc:91:
  663. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::int64 google::protobuf::strto64(const char*, char**, int)':
  664. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:341:25: warning: typedef 'sizeof_int64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  665. sizeof_int64_is_not_sizeof_long_long);
  666. ^
  667. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  668. msg[bool(expr) ? 1 : -1]
  669. ^
  670. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h: In function 'google::protobuf::uint64 google::protobuf::strtou64(const char*, char**, int)':
  671. ../../protobuf-2.6.0/src/google/protobuf/stubs/strutil.h:347:25: warning: typedef 'sizeof_uint64_is_not_sizeof_long_long' locally defined but not used [-Wunused-local-typedefs]
  672. sizeof_uint64_is_not_sizeof_long_long);
  673. ^
  674. ../../protobuf-2.6.0/src/google/protobuf/stubs/common.h:382:11: note: in definition of macro 'GOOGLE_COMPILE_ASSERT'
  675. msg[bool(expr) ? 1 : -1]
  676. ^
  677. depbase=`echo google/protobuf/io/zero_copy_stream_impl.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
  678. /bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream_impl.lo -MD -MP -MF $depbase.Tpo -c -o google/protobuf/io/zero_copy_stream_impl.lo ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream_impl.cc &&\
  679. mv -f $depbase.Tpo $depbase.Plo
  680. libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../protobuf-2.6.0/src -I.. -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -MT google/protobuf/io/zero_copy_stream_impl.lo -MD -MP -MF google/protobuf/io/.deps/zero_copy_stream_impl.Tpo -c ../../protobuf-2.6.0/src/google/protobuf/io/zero_copy_stream_impl.cc -fPIC -DPIC -o google/protobuf/io/.libs/zero_copy_stream_impl.o
  681. /bin/sh ../libtool --tag=CXX --mode=link g++ -pthread -Wall -Wwrite-strings -Woverloaded-virtual -Wno-sign-compare -Wno-return-type -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -version-info 9:0:0 -export-dynamic -no-undefined -o libprotobuf.la -rpath /usr/local/lib google/protobuf/stubs/atomicops_internals_x86_gcc.lo google/protobuf/stubs/atomicops_internals_x86_msvc.lo google/protobuf/stubs/common.lo google/protobuf/stubs/once.lo google/protobuf/stubs/stringprintf.lo google/protobuf/extension_set.lo google/protobuf/generated_message_util.lo google/protobuf/message_lite.lo google/protobuf/repeated_field.lo google/protobuf/wire_format_lite.lo google/protobuf/io/coded_stream.lo google/protobuf/io/zero_copy_stream.lo google/protobuf/io/zero_copy_stream_impl_lite.lo google/protobuf/stubs/strutil.lo google/protobuf/stubs/substitute.lo google/protobuf/stubs/structurally_valid.lo google/protobuf/descriptor.lo google/protobuf/descriptor.pb.lo google/protobuf/descriptor_database.lo google/protobuf/dynamic_message.lo google/protobuf/extension_set_heavy.lo google/protobuf/generated_message_reflection.lo google/protobuf/message.lo google/protobuf/reflection_ops.lo google/protobuf/service.lo google/protobuf/text_format.lo google/protobuf/unknown_field_set.lo google/protobuf/wire_format.lo google/protobuf/io/gzip_stream.lo google/protobuf/io/printer.lo google/protobuf/io/strtod.lo google/protobuf/io/tokenizer.lo google/protobuf/io/zero_copy_stream_impl.lo -lpthread -lz
  682. libtool: link: rm -fr .libs/libprotobuf.la .libs/libprotobuf.lai .libs/libprotobuf.so .libs/libprotobuf.so.9 .libs/libprotobuf.so.9.0.0
  683. libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/crtbeginS.o google/protobuf/stubs/.libs/atomicops_internals_x86_gcc.o google/protobuf/stubs/.libs/atomicops_internals_x86_msvc.o google/protobuf/stubs/.libs/common.o google/protobuf/stubs/.libs/once.o google/protobuf/stubs/.libs/stringprintf.o google/protobuf/.libs/extension_set.o google/protobuf/.libs/generated_message_util.o google/protobuf/.libs/message_lite.o google/protobuf/.libs/repeated_field.o google/protobuf/.libs/wire_format_lite.o google/protobuf/io/.libs/coded_stream.o google/protobuf/io/.libs/zero_copy_stream.o google/protobuf/io/.libs/zero_copy_stream_impl_lite.o google/protobuf/stubs/.libs/strutil.o google/protobuf/stubs/.libs/substitute.o google/protobuf/stubs/.libs/structurally_valid.o google/protobuf/.libs/descriptor.o google/protobuf/.libs/descriptor.pb.o google/protobuf/.libs/descriptor_database.o google/protobuf/.libs/dynamic_message.o google/protobuf/.libs/extension_set_heavy.o google/protobuf/.libs/generated_message_reflection.o google/protobuf/.libs/message.o google/protobuf/.libs/reflection_ops.o google/protobuf/.libs/service.o google/protobuf/.libs/text_format.o google/protobuf/.libs/unknown_field_set.o google/protobuf/.libs/wire_format.o google/protobuf/io/.libs/gzip_stream.o google/protobuf/io/.libs/printer.o google/protobuf/io/.libs/strtod.o google/protobuf/io/.libs/tokenizer.o google/protobuf/io/.libs/zero_copy_stream_impl.o -lpthread -lz -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/crtendS.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.3.0/../../../../lib/crtn.o -pthread -march=x86-64 -mtune=generic -O2 -fstack-protector-strong -pthread -Wl,-soname -Wl,libprotobuf.so.9 -o .libs/libprotobuf.so.9.0.0
  684. libtool: link: (cd ".libs" && rm -f "libprotobuf.so.9" && ln -s "libprotobuf.so.9.0.0" "libprotobuf.so.9")
  685. libtool: link: (cd ".libs" && rm -f "libprotobuf.so" && ln -s "libprotobuf.so.9.0.0" "libprotobuf.so")
  686. libtool: link: ( cd ".libs" && rm -f "libprotobuf.la" && ln -s "../libprotobuf.la" "libprotobuf.la" )
  687. make[2]: Leaving directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build/src'
  688. make[1]: Leaving directory '/tmp/RtmpvbYK3d/R.INSTALL5d69692d20d4/flowWorkspace/src/pb_build'
  689. configure: Using the following compilation and linking flags for flowWorkspace
  690. configure: PKG_CPPFLAGS=-I/usr/include/libxml2 -Iprotobuf-2.6.0/src
  691. configure: PKG_LIBS=-lxml2 -lz -lm -ldl
  692. configure: creating ./config.status
  693. config.status: creating src/Makevars
  694. ** libs
  695. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c GatingHierarchy.cpp -o GatingHierarchy.o
  696. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c GatingSet.cpp -o GatingSet.o
  697. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c GatingSet.pb.cc -o GatingSet.pb.o
  698. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c POPINDICES.cpp -o POPINDICES.o
  699. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c R_API.cpp -o R_API.o
  700. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c R_GatingHierarchy.cpp -o R_GatingHierarchy.o
  701. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c R_GatingSet.cpp -o R_GatingSet.o
  702. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c RcppExports.cpp -o RcppExports.o
  703. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c calibrationTable.cpp -o calibrationTable.o
  704. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c delimitedMessage.cpp -o delimitedMessage.o
  705. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c flowData.cpp -o flowData.o
  706. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c flowJoWorkspace.cpp -o flowJoWorkspace.o
  707. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c gate.cpp -o gate.o
  708. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c global.cpp -o global.o
  709. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c macFlowJoWorkspace.cpp -o macFlowJoWorkspace.o
  710. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c nodeProperties.cpp -o nodeProperties.o
  711. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c spline.cpp -o spline.o
  712. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c transformation.cpp -o transformation.o
  713. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c winFlowJoWorkspace.cpp -o winFlowJoWorkspace.o
  714. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c workspace.cpp -o workspace.o
  715. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c wsNode.cpp -o wsNode.o
  716. g++ -I/usr/include/R/ -DNDEBUG -DROUT -I/usr/include/libxml2 -Iprotobuf-2.6.0/src -Iboost_serialization -D_FORTIFY_SOURCE=2 -I"/home/vict/R/empty_testlib/Rcpp/include" -I"/home/vict/R/empty_testlib/BH/include" -fpic -march=x86-64 -mtune=generic -O2 -pipe -fstack-protector-strong -c boost_serialization/basic_archive.cpp -o boost_serialization/basic_archive.o
  717. boost_serialization/basic_archive.cpp:44:20: error: expected unqualified-id before ‘const’
  718. BOOST_ARCHIVE_DECL(const char *)
  719. ^
  720. boost_serialization/basic_archive.cpp:44:20: error: expected ‘)’ before ‘const’
  721. boost_serialization/basic_archive.cpp:78:1: error: expected constructor, destructor, or type conversion before ‘BOOST_ARCHIVE_VERSION’
  722. BOOST_ARCHIVE_VERSION(){
  723. ^
  724. /usr/lib64/R/etc/Makeconf:143: recipe for target 'boost_serialization/basic_archive.o' failed
  725. make: *** [boost_serialization/basic_archive.o] Error 1
  726. ERROR: compilation failed for package ‘flowWorkspace’
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