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Othanc issue

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Jul 20th, 2016
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  1.  
  2. -- Found PythonInterp: /usr/bin/python (found version "2.6.6")
  3. -- Looking for include file uuid/uuid.h
  4. -- Looking for include file uuid/uuid.h - found
  5. patching file mongoose.c
  6. Reversed (or previously applied) patch detected! Skipping patch.
  7. 2 out of 2 hunks ignored -- saving rejects to file mongoose.c.rej
  8. -- Info: DCMTK's builtin private dictionary support will be disabled
  9. -- Info: Thread support will be disabled
  10. -- Looking for sys/types.h
  11. -- Looking for sys/types.h - found
  12. -- Looking for stdint.h
  13. -- Looking for stdint.h - found
  14. -- Looking for stddef.h
  15. -- Looking for stddef.h - found
  16. -- Check size of char
  17. -- Check size of char - done
  18. -- Check size of double
  19. -- Check size of double - done
  20. -- Check size of float
  21. -- Check size of float - done
  22. -- Check size of int
  23. -- Check size of int - done
  24. -- Check size of long
  25. -- Check size of long - done
  26. -- Check size of short
  27. -- Check size of short - done
  28. -- Check size of void*
  29. -- Check size of void* - done
  30. -- Looking for C++ include errno.h
  31. -- Looking for C++ include errno.h - found
  32. -- Looking for C++ include dirent.h
  33. -- Looking for C++ include dirent.h - found
  34. -- Looking for C++ include fcntl.h
  35. -- Looking for C++ include fcntl.h - found
  36. -- Looking for C++ include fstream
  37. -- Looking for C++ include fstream - found
  38. -- Looking for C++ include fstream.h
  39. -- Looking for C++ include fstream.h - not found
  40. -- Looking for C++ include fnmatch.h
  41. -- Looking for C++ include fnmatch.h - found
  42. -- Looking for C++ include float.h
  43. -- Looking for C++ include float.h - found
  44. -- Looking for C++ include malloc.h
  45. -- Looking for C++ include malloc.h - found
  46. -- Looking for C++ include math.h
  47. -- Looking for C++ include math.h - found
  48. -- Looking for C++ include ieeefp.h
  49. -- Looking for C++ include ieeefp.h - not found
  50. -- Looking for C++ include inttypes.h
  51. -- Looking for C++ include inttypes.h - found
  52. -- Looking for C++ include iomanip
  53. -- Looking for C++ include iomanip - found
  54. -- Looking for C++ include iomanip.h
  55. -- Looking for C++ include iomanip.h - not found
  56. -- Looking for C++ include iostream
  57. -- Looking for C++ include iostream - found
  58. -- Looking for C++ include iostream.h
  59. -- Looking for C++ include iostream.h - not found
  60. -- Looking for C++ include io.h
  61. -- Looking for C++ include io.h - not found
  62. -- Looking for C++ include iso646.h
  63. -- Looking for C++ include iso646.h - found
  64. -- Looking for C++ include png.h
  65. -- Looking for C++ include png.h - not found
  66. -- Looking for C++ include limits.h
  67. -- Looking for C++ include limits.h - found
  68. -- Looking for C++ include locale.h
  69. -- Looking for C++ include locale.h - found
  70. -- Looking for C++ include ndir.h
  71. -- Looking for C++ include ndir.h - not found
  72. -- Looking for C++ include netdb.h
  73. -- Looking for C++ include netdb.h - found
  74. -- Looking for C++ include new.h
  75. -- Looking for C++ include new.h - not found
  76. -- Looking for C++ include semaphore.h
  77. -- Looking for C++ include semaphore.h - found
  78. -- Looking for C++ include setjmp.h
  79. -- Looking for C++ include setjmp.h - found
  80. -- Looking for C++ include sstream
  81. -- Looking for C++ include sstream - found
  82. -- Looking for C++ include sstream.h
  83. -- Looking for C++ include sstream.h - not found
  84. -- Looking for C++ include stat.h
  85. -- Looking for C++ include stat.h - not found
  86. -- Looking for C++ include stdio.h
  87. -- Looking for C++ include stdio.h - found
  88. -- Looking for C++ include cstdio
  89. -- Looking for C++ include cstdio - found
  90. -- Looking for C++ include strings.h
  91. -- Looking for C++ include strings.h - found
  92. -- Looking for C++ include string.h
  93. -- Looking for C++ include string.h - found
  94. -- Looking for C++ include strstream.h
  95. -- Looking for C++ include strstream.h - not found
  96. -- Looking for C++ include strstream
  97. -- Looking for C++ include strstream - found
  98. -- Looking for C++ include strstrea.h
  99. -- Looking for C++ include strstrea.h - not found
  100. -- Looking for C++ include synch.h
  101. -- Looking for C++ include synch.h - not found
  102. -- Looking for C++ include sys/errno.h
  103. -- Looking for C++ include sys/errno.h - found
  104. -- Looking for C++ include sys/dir.h
  105. -- Looking for C++ include sys/dir.h - found
  106. -- Looking for C++ include sys/file.h
  107. -- Looking for C++ include sys/file.h - found
  108. -- Looking for C++ include sys/ndir.h
  109. -- Looking for C++ include sys/ndir.h - not found
  110. -- Looking for C++ include sys/param.h
  111. -- Looking for C++ include sys/param.h - found
  112. -- Looking for C++ include sys/resource.h
  113. -- Looking for C++ include sys/resource.h - found
  114. -- Looking for C++ include sys/select.h
  115. -- Looking for C++ include sys/select.h - found
  116. -- Looking for C++ include sys/time.h
  117. -- Looking for C++ include sys/time.h - found
  118. -- Looking for C++ include sys/utime.h
  119. -- Looking for C++ include sys/utime.h - not found
  120. -- Looking for C++ include sys/utsname.h
  121. -- Looking for C++ include sys/utsname.h - found
  122. -- Looking for C++ include sys/wait.h
  123. -- Looking for C++ include sys/wait.h - found
  124. -- Looking for C++ include sys/socket.h
  125. -- Looking for C++ include sys/socket.h - found
  126. -- Looking for C++ include thread.h
  127. -- Looking for C++ include thread.h - not found
  128. -- Looking for C++ include sys/stat.h
  129. -- Looking for C++ include sys/stat.h - found
  130. -- Looking for C++ include time.h
  131. -- Looking for C++ include time.h - found
  132. -- Looking for C++ include unistd.h
  133. -- Looking for C++ include unistd.h - found
  134. -- Looking for C++ include unix.h
  135. -- Looking for C++ include unix.h - not found
  136. -- Looking for C++ include utime.h
  137. -- Looking for C++ include utime.h - found
  138. -- Looking for C++ include wctype.h
  139. -- Looking for C++ include wctype.h - found
  140. -- Looking for C++ include alloca.h
  141. -- Looking for C++ include alloca.h - found
  142. -- Looking for C++ include arpa/inet.h
  143. -- Looking for C++ include arpa/inet.h - found
  144. -- Looking for C++ include ctype.h
  145. -- Looking for C++ include ctype.h - found
  146. -- Looking for C++ include memory.h
  147. -- Looking for C++ include memory.h - found
  148. -- Looking for C++ include pthread.h
  149. -- Looking for C++ include pthread.h - found
  150. -- Looking for C++ include libc.h
  151. -- Looking for C++ include libc.h - not found
  152. -- Looking for C++ include stdlib.h
  153. -- Looking for C++ include stdlib.h - found
  154. -- Looking for C++ include stdarg.h
  155. -- Looking for C++ include stdarg.h - found
  156. -- Looking for C++ include cstdarg
  157. -- Looking for C++ include cstdarg - found
  158. -- Looking for C++ include signal.h
  159. -- Looking for C++ include signal.h - found
  160. -- Looking for include files sys/types.h, netinet/in_systm.h
  161. -- Looking for include files sys/types.h, netinet/in_systm.h - found
  162. -- Looking for 3 include files sys/types.h, ..., netinet/in.h
  163. -- Looking for 3 include files sys/types.h, ..., netinet/in.h - found
  164. -- Looking for 4 include files sys/types.h, ..., netinet/tcp.h
  165. -- Looking for 4 include files sys/types.h, ..., netinet/tcp.h - found
  166. -- Looking for connect
  167. -- Looking for connect - found
  168. -- Looking for accept
  169. -- Looking for accept - found
  170. -- Looking for access
  171. -- Looking for access - found
  172. -- Looking for bcmp
  173. -- Looking for bcmp - found
  174. -- Looking for bcopy
  175. -- Looking for bcopy - found
  176. -- Looking for bind
  177. -- Looking for bind - found
  178. -- Looking for bzero
  179. -- Looking for bzero - found
  180. -- Looking for cuserid
  181. -- Looking for cuserid - found
  182. -- Looking for vprintf
  183. -- Looking for vprintf - found
  184. -- Looking for finite
  185. -- Looking for finite - found
  186. -- Looking for _doprnt
  187. -- Looking for _doprnt - not found
  188. -- Looking for flock
  189. -- Looking for flock - found
  190. -- Looking for fork
  191. -- Looking for fork - found
  192. -- Looking for getenv
  193. -- Looking for getenv - found
  194. -- Looking for geteuid
  195. -- Looking for geteuid - found
  196. -- Looking for gethostbyname
  197. -- Looking for gethostbyname - found
  198. -- Looking for gethostname
  199. -- Looking for gethostname - found
  200. -- Looking for gethostid
  201. -- Looking for gethostid - found
  202. -- Looking for getlogin
  203. -- Looking for getlogin - found
  204. -- Looking for getpid
  205. -- Looking for getpid - found
  206. -- Looking for getsockname
  207. -- Looking for getsockname - found
  208. -- Looking for getsockopt
  209. -- Looking for getsockopt - found
  210. -- Looking for getuid
  211. -- Looking for getuid - found
  212. -- Looking for index
  213. -- Looking for index - found
  214. -- Looking for isinf
  215. -- Looking for isinf - found
  216. -- Looking for isnan
  217. -- Looking for isnan - found
  218. -- Looking for itoa
  219. -- Looking for itoa - not found
  220. -- Looking for listen
  221. -- Looking for listen - found
  222. -- Looking for lockf
  223. -- Looking for lockf - found
  224. -- Looking for malloc_debug
  225. -- Looking for malloc_debug - not found
  226. -- Looking for memcmp
  227. -- Looking for memcmp - found
  228. -- Looking for memcpy
  229. -- Looking for memcpy - found
  230. -- Looking for memmove
  231. -- Looking for memmove - found
  232. -- Looking for memset
  233. -- Looking for memset - found
  234. -- Looking for mkstemp
  235. -- Looking for mkstemp - found
  236. -- Looking for mktemp
  237. -- Looking for mktemp - found
  238. -- Looking for rindex
  239. -- Looking for rindex - found
  240. -- Looking for select
  241. -- Looking for select - found
  242. -- Looking for setsockopt
  243. -- Looking for setsockopt - found
  244. -- Looking for setuid
  245. -- Looking for setuid - found
  246. -- Looking for sleep
  247. -- Looking for sleep - found
  248. -- Looking for socket
  249. -- Looking for socket - found
  250. -- Looking for stat
  251. -- Looking for stat - found
  252. -- Looking for strchr
  253. -- Looking for strchr - found
  254. -- Looking for strdup
  255. -- Looking for strdup - found
  256. -- Looking for strerror
  257. -- Looking for strerror - found
  258. -- Looking for strlcat
  259. -- Looking for strlcat - not found
  260. -- Looking for strlcpy
  261. -- Looking for strlcpy - not found
  262. -- Looking for strstr
  263. -- Looking for strstr - found
  264. -- Looking for strtoul
  265. -- Looking for strtoul - found
  266. -- Looking for sysinfo
  267. -- Looking for sysinfo - found
  268. -- Looking for tempnam
  269. -- Looking for tempnam - found
  270. -- Looking for tmpnam
  271. -- Looking for tmpnam - found
  272. -- Looking for uname
  273. -- Looking for uname - found
  274. -- Looking for usleep
  275. -- Looking for usleep - found
  276. -- Looking for waitpid
  277. -- Looking for waitpid - found
  278. -- Looking for _findfirst
  279. -- Looking for _findfirst - not found
  280. -- Looking for isinf
  281. -- Looking for isinf - found
  282. -- Looking for isnan
  283. -- Looking for isnan - found
  284. -- Looking for finite
  285. -- Looking for finite - found
  286. -- Looking for flock
  287. -- Looking for flock - found
  288. -- Looking for gethostbyname
  289. -- Looking for gethostbyname - found
  290. -- Looking for gethostid
  291. -- Looking for gethostid - found
  292. -- Looking for bzero
  293. -- Looking for bzero - found
  294. -- Looking for gethostname
  295. -- Looking for gethostname - found
  296. -- Looking for waitpid
  297. -- Looking for waitpid - found
  298. -- Looking for wait3
  299. -- Looking for wait3 - found
  300. -- Looking for usleep
  301. -- Looking for usleep - found
  302. -- Looking for accept
  303. -- Looking for accept - found
  304. -- Looking for bind
  305. -- Looking for bind - found
  306. -- Looking for getsockname
  307. -- Looking for getsockname - found
  308. -- Looking for getsockopt
  309. -- Looking for getsockopt - found
  310. CMake Warning (dev) at dcmtk-3.6.0/CMake/CheckFunctionWithHeaderExists.cmake:11 (IF):
  311. Policy CMP0054 is not set: Only interpret if() arguments as variables or
  312. keywords when unquoted. Run "cmake --help-policy CMP0054" for policy
  313. details. Use the cmake_policy command to set the policy and suppress this
  314. warning.
  315.  
  316. Quoted variables like "HAVE_PROTOTYPE_GETSOCKNAME" will no longer be
  317. dereferenced when the policy is set to NEW. Since the policy is not set
  318. the OLD behavior will be used.
  319. Call Stack (most recent call first):
  320. dcmtk-3.6.0/CMake/GenerateDCMTKConfigure.cmake:358 (CHECK_FUNCTIONWITHHEADER_EXISTS)
  321. Resources/CMake/DcmtkConfiguration.cmake:43 (include)
  322. CMakeLists.txt:305 (include)
  323. This warning is for project developers. Use -Wno-dev to suppress it.
  324.  
  325. -- Looking for setsockopt
  326. -- Looking for setsockopt - found
  327. -- Looking for socket
  328. -- Looking for socket - found
  329. -- Looking for listen
  330. -- Looking for listen - found
  331. -- Looking for std::vfprintf
  332. -- Looking for std::vfprintf - found
  333. -- Looking for std::vsnprintf
  334. -- Looking for std::vsnprintf - found
  335. -- Looking for _stricmp
  336. -- Looking for _stricmp - not found.
  337. -- Looking for socklen_t definition
  338. -- Looking for socklen_t definition - found
  339. -- Looking for gettimeofday
  340. -- Looking for gettimeofday - found
  341. -- Looking for connect
  342. -- Looking for connect - found
  343. -- Looking for mkstemp
  344. -- Looking for mkstemp - found
  345. -- Looking for mktemp
  346. -- Looking for mktemp - found
  347. -- Looking for select
  348. -- Looking for select - found
  349. -- Looking for strcasecmp
  350. -- Looking for strcasecmp - found
  351. -- Looking for strncasecmp
  352. -- Looking for strncasecmp - found
  353. -- Looking for strerror_r
  354. -- Looking for strerror_r - found
  355. -- Looking for std::ios_base::openmode definition
  356. -- Looking for std::ios_base::openmode definition - not found.
  357. -- Looking for pthread_rwlock_init
  358. -- Looking for pthread_rwlock_init - found
  359. -- Looking for uchar definition
  360. -- Looking for uchar definition - not found.
  361. -- Looking for ushort definition
  362. -- Looking for ushort definition - found
  363. -- Looking for uint definition
  364. -- Looking for uint definition - found
  365. -- Looking for ulong definition
  366. -- Looking for ulong definition - found
  367. -- Looking for longlong definition
  368. -- Looking for longlong definition - not found.
  369. -- Looking for ulonglong definition
  370. -- Looking for ulonglong definition - not found.
  371. -- Checking support for C++ type bool
  372. -- Checking support for C++ type bool -- yes
  373. -- Checking signedness of char
  374. -- Checking signedness of char -- signed
  375. -- Checking whether pthread_t is a pointer type
  376. -- Checking whether pthread_t is a pointer type -- no
  377. -- Checking whether typename works correctly
  378. -- Checking whether typename works correctly -- yes
  379. -- Checking whether ENAMETOOLONG is defined
  380. -- Checking whether ENAMETOOLONG is defined -- yes
  381. -- Checking whether strerror_r returns an int
  382. -- Checking whether strerror_r returns an int -- no
  383. -- Checking whether variable length arrays are supported
  384. -- Checking whether variable length arrays are supported -- yes
  385. -- Checking whether std::ios::nocreate exists
  386. -- Checking whether std::ios::nocreate exists -- no
  387. -- Checking whether socket functions accept an int* argument
  388. -- Checking whether socket functions accept an int* argument -- no
  389. -- Checking whether select() accepts an int* argument
  390. -- Checking whether select() accepts an int* argument -- no
  391. patching file dcmtk-3.6.0/dcmnet/libsrc/dul.cc
  392. Reversed (or previously applied) patch detected! Skipping patch.
  393. 3 out of 3 hunks ignored -- saving rejects to file dcmtk-3.6.0/dcmnet/libsrc/dul.cc.rej
  394. patching file dcmtk-3.6.0/dcmnet/libsrc/dulfsm.cc
  395. Reversed (or previously applied) patch detected! Skipping patch.
  396. 1 out of 1 hunk ignored -- saving rejects to file dcmtk-3.6.0/dcmnet/libsrc/dulfsm.cc.rej
  397. DCMTK version: 360
  398. -- Found Doxygen: /usr/bin/doxygen (found version "1.7.1")
  399. -- Configuring done
  400. -- Generating done
  401. CMake Warning:
  402. Manually-specified variables were not used by the project:
  403.  
  404. CMAKE_INCLUDE_PATH
  405. CMAKE_LIBRARY_PATH
  406.  
  407.  
  408. -- Build files have been written to: /SRC/Orthanc-1.1.0
  409. root@debian:/SRC/Orthanc-1.1.0# make
  410. make: Warning: File `Makefile' has modification time 1.2e+06 s in the future
  411. make[1]: Warning: File `CMakeFiles/Makefile2' has modification time 1.2e+06 s in the future
  412. make[2]: Warning: File `CMakeFiles/CoreLibrary.dir/flags.make' has modification time 1.1e+06 s in the future
  413. [ 0%] Generating AUTOGENERATED/EmbeddedResources.h, AUTOGENERATED/EmbeddedResources.cpp
  414. Scanning dependencies of target CoreLibrary
  415. make[2]: warning: Clock skew detected. Your build may be incomplete.
  416. make[2]: Warning: File `CMakeFiles/CoreLibrary.dir/flags.make' has modification time 1.1e+06 s in the future
  417. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Cache/MemoryCache.cpp.o
  418. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Cache/SharedArchive.cpp.o
  419. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/ChunkedBuffer.cpp.o
  420. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Compression/DeflateBaseCompressor.cpp.o
  421. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Compression/GzipCompressor.cpp.o
  422. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Compression/HierarchicalZipWriter.cpp.o
  423. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Compression/ZipWriter.cpp.o
  424. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/Compression/ZlibCompressor.cpp.o
  425. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/DicomFormat/DicomArray.cpp.o
  426. [ 0%] Building CXX object CMakeFiles/CoreLibrary.dir/Core/DicomFormat/DicomMap.cpp.o
  427. /SRC/Orthanc-1.1.0/Core/DicomFormat/DicomMap.cpp: In function ‘uint16_t Orthanc::ReadUnsignedInteger16(const char*)’:
  428. /SRC/Orthanc-1.1.0/Core/DicomFormat/DicomMap.cpp:479: error: ‘le16toh’ was not declared in this scope
  429. /SRC/Orthanc-1.1.0/Core/DicomFormat/DicomMap.cpp: In function ‘uint32_t Orthanc::ReadUnsignedInteger32(const char*)’:
  430. /SRC/Orthanc-1.1.0/Core/DicomFormat/DicomMap.cpp:485: error: ‘le32toh’ was not declared in this scope
  431. make[2]: *** [CMakeFiles/CoreLibrary.dir/Core/DicomFormat/DicomMap.cpp.o] Error 1
  432. make[1]: *** [CMakeFiles/CoreLibrary.dir/all] Error 2
  433. make: *** [all] Error 2
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