Advertisement
Not a member of Pastebin yet?
Sign Up,
it unlocks many cool features!
- TESTING: configureMissingSrandPrototype from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:135)
- TESTING: configureFPTrap from config.utilities.FPTrap(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/FPTrap.py:27)
- TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27)
- TESTING: configureMkdir from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:23)
- TESTING: configureAutoreconf from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:45)
- TESTING: configurePrograms from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:72)
- TESTING: configureMake from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:83)
- TESTING: configureCheckGNUMake from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:120)
- TESTING: configureMakeNP from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:158)
- TESTING: alternateConfigureLibrary from config.packages.OpenMPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.MPICH(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:483)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: configureConversion from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:217)
- TESTING: configureMPI2 from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:180)
- TESTING: configureTypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:237)
- TESTING: configureMPITypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:249)
- TESTING: configureMissingPrototypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:325)
- TESTING: SGIMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:344)
- TESTING: CxxMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:354)
- TESTING: FortranMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:372)
- TESTING: configureIO from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:397)
- TESTING: findMPIInc from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:459)
- TESTING: checkMPICHorOpenMPI from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:434)
- TESTING: checkSharedLibrary from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:130)
- TESTING: configureMPIEXEC from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:143)
- TESTING: alternateConfigureLibrary from config.packages.libjpeg(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.yaml(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.valgrind(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- ===============================================================================
- It appears you do not have valgrind installed on your system.
- We HIGHLY recommend you install it from www.valgrind.org
- Or install valgrind-devel or equivalent using your package manager.
- Then rerun ./configure
- ===============================================================================
- TESTING: alternateConfigureLibrary from config.packages.opengles(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.opengl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.glut(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.Numpy(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/Numpy.py:11)
- TESTING: checkSharedLibrary from config.packages.Numpy(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.petsc4py(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/petsc4py.py:105)
- TESTING: alternateConfigureLibrary from config.packages.mpi4py(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/mpi4py.py:70)
- TESTING: configureLibrary from config.packages.fftw(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.fftw(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.ctetgen(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: locateC2html from config.packages.c2html(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/c2html.py:33)
- TESTING: configureLibrary from config.packages.pthread(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/pthread.py:19)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.pthread(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.ssl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/ssl.py:27)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.ssl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.PARTY(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.tchem(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.cgns(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.tetgen(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.p4est(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.giflib(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.pami(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.papi(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.libpng(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.saws(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Mathematica(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.scientificpython(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/scientificpython.py:46)
- TESTING: checkSharedLibrary from config.packages.scientificpython(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.fiat(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/fiat.py:42)
- TESTING: checkSharedLibrary from config.packages.fiat(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.revolve(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.sprng(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.mpe(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.X(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Triangle(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.boost(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.boost(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.openmp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.PTScotch(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.PTScotch(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.hwloc(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.hwloc(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.Matlab(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/Matlab.py:35)
- TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Chaco(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.concurrencykit(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.hdf5(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.ascem-io(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.netcdf(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.MOAB(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.exodusii(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.pflotran(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.gmp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.mpfr(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: locateCMake from config.packages.cmake(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/cmake.py:33)
- TESTING: alternateConfigureLibrary from config.packages.unittestcpp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.alquimia(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureScalarType from PETSc.options.scalarTypes(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/scalarTypes.py:37)
- TESTING: configurePrecision from PETSc.options.scalarTypes(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/scalarTypes.py:77)
- TESTING: alternateConfigureLibrary from config.packages.opencl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.viennacl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.fblaslapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:333)
- TESTING: checkLib from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:106)
- TESTING: check64BitBLASIndices from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:483)
- TESTING: checkESSL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:400)
- TESTING: checkPESSL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:416)
- TESTING: checkMKL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:408)
- TESTING: checkMissing from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:441)
- TESTING: checklsame from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:456)
- TESTING: checksdotreturnsdouble from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:518)
- TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.SuiteSparse(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- *******************************************************************************
- UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):
- -------------------------------------------------------------------------------
- --with-suitesparse-lib=['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Lib/libumfpack.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Lib/libklu.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Lib/libcholmod.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Lib/libbtf.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Lib/libccolamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Lib/libcolamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Lib/libcamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Lib/libamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config/libsuitesparseconfig.a'] and
- --with-suitesparse-include=['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config'] did not work
- *******************************************************************************
- == 2016-08-29 14:33:39,007 build_log.py:152 ERROR cmd " ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/PETSc/3.7.3-foss-2016a-Python-2.7.11 --LIBS="$LIBS" -lrt --with-cc="mpicc" --with-cxx="mpicxx" --with-c++-support --with-fc="mpifort" --CFLAGS="-fPIC -O2 -march=native" --CXXFLAGS="-fPIC -O2 -march=native" --FFLAGS="-fPIC -O2 -march=native" --with-mpi=1 --with-build-step-np=16 --with-shared-libraries=0 --with-debugging=0 --with-pic=1 --with-x=0 --with-windows-graphics=0 --with-numpy=1 --with-fftw=1 --with-fftw-include=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FFTW/3.3.4-gompi-2016a/include --with-fftw-lib=[/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FFTW/3.3.4-gompi-2016a/lib/libfftw3_mpi.a,libfftw3.a] --with-scalapack=1 --with-scalapack-include=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include --with-scalapack-lib=[/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib/libscalapack.a,libopenblas.a,libgfortran.a] --with-blas-lapack-lib=[/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib/libopenblas.a,libgfortran.a] --with-boost=1 --with-boost-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Boost/1.61.0-foss-2016a-Python-2.7.11 --with-scientificpython=1 --with-scientificpython-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScientificPython/2.9.4-foss-2016a-Python-2.7.11 --with-fiat=1 --with-fiat-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FIAT/1.6.0-foss-2016a-Python-2.7.11 --with-metis=1 --with-metis-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/METIS/5.1.0-foss-2016a --with-parmetis=1 --with-parmetis-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ParMETIS/4.0.3-foss-2016a --with-ptscotch=1 --with-ptscotch-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SCOTCH/6.0.4-foss-2016a --with-hypre=1 --with-hypre-dir=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Hypre/2.11.1-foss-2016a --with-suitesparse=1 --with-suitesparse-include=[/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Include,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config] --with-suitesparse-lib=[/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Lib/libumfpack.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Lib/libklu.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Lib/libcholmod.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Lib/libbtf.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Lib/libccolamd.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Lib/libcolamd.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Lib/libcamd.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Lib/libamd.a,/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config/libsuitesparseconfig.a] " exited with exitcode 1 and output:
- ===============================================================================
- Configuring PETSc to compile on your system
- ===============================================================================
- TESTING: configureExternalPackagesDir from config.framework(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/framework.py:834)
- TESTING: configureDebuggers from config.utilities.debuggers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/debuggers.py:22)
- TESTING: configureGit from config.sourceControl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/sourceControl.py:24)
- TESTING: configureMercurial from config.sourceControl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/sourceControl.py:35)
- TESTING: configureCLanguage from PETSc.options.languages(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/languages.py:27)
- TESTING: configureDirectories from PETSc.options.petscdir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/petscdir.py:23)
- TESTING: getDatafilespath from PETSc.options.dataFilesPath(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/dataFilesPath.py:29)
- TESTING: configureInstallationMethod from PETSc.options.petscclone(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/petscclone.py:20)
- TESTING: configureArchitecture from PETSc.options.arch(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/arch.py:25)
- TESTING: setInstallDir from PETSc.options.installDir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/installDir.py:35)
- TESTING: saveReconfigure from PETSc.options.installDir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/installDir.py:74)
- TESTING: cleanInstallDir from PETSc.options.installDir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/installDir.py:67)
- TESTING: configureInstallDir from PETSc.options.installDir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/installDir.py:51)
- TESTING: restoreReconfigure from PETSc.options.installDir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/installDir.py:87)
- TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/externalpackagesdir.py:15)
- TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/externalpackagesdir.py:22)
- TESTING: printEnvVariables from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1592)
- TESTING: resetEnvCompilers from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1599)
- ===============================================================================
- ***** WARNING: F77 (set to mpifort) found in environment variables - ignoring
- use ./configure F77=$F77 if you really want to use that value ******
- ===============================================================================
- ===============================================================================
- ***** WARNING: F90 (set to mpifort) found in environment variables - ignoring
- use ./configure F90=$F90 if you really want to use that value ******
- ===============================================================================
- ===============================================================================
- ***** WARNING: FCFLAGS (set to -fPIC -O2 -march=native) found in environment variables - ignoring
- use ./configure FCFLAGS=$FCFLAGS if you really want to use that value ******
- ===============================================================================
- ===============================================================================
- ***** WARNING: F90FLAGS (set to -fPIC -O2 -march=native) found in environment variables - ignoring
- use ./configure F90FLAGS=$F90FLAGS if you really want to use that value ******
- ===============================================================================
- ===============================================================================
- ***** WARNING: CPPFLAGS (set to -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FFTW/3.3.4-gompi-2016a/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Boost/1.61.0-foss-2016a-Python-2.7.11/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScientificPython/2.9.4-foss-2016a-Python-2.7.11/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/METIS/5.1.0-foss-2016a/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ParMETIS/4.0.3-foss-2016a/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SCOTCH/6.0.4-foss-2016a/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/include -I/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Hypre/2.11.1-foss-2016a/include) found in environment variables - ignoring
- use ./configure CPPFLAGS=$CPPFLAGS if you really want to use that value ******
- ===============================================================================
- ===============================================================================
- ***** WARNING: LDFLAGS (set to -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/GCCcore/4.9.3/lib64 -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/GCCcore/4.9.3/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/OpenBLAS/0.2.15-GCC-4.9.3-2.25-LAPACK-3.6.0/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScaLAPACK/2.0.2-gompi-2016a-OpenBLAS-0.2.15-LAPACK-3.6.0/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FFTW/3.3.4-gompi-2016a/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Boost/1.61.0-foss-2016a-Python-2.7.11/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ScientificPython/2.9.4-foss-2016a-Python-2.7.11/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/FIAT/1.6.0-foss-2016a-Python-2.7.11/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/METIS/5.1.0-foss-2016a/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/ParMETIS/4.0.3-foss-2016a/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SCOTCH/6.0.4-foss-2016a/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/lib -L/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/Hypre/2.11.1-foss-2016a/lib) found in environment variables - ignoring
- use ./configure LDFLAGS=$LDFLAGS if you really want to use that value ******
- ===============================================================================
- TESTING: checkEnvCompilers from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1629)
- TESTING: checkMPICompilerOverride from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1564)
- TESTING: requireMpiLdPath from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1583)
- TESTING: checkVendor from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:417)
- TESTING: checkInitialFlags from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:427)
- TESTING: checkCCompiler from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:553)
- TESTING: checkCPreprocessor from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:586)
- TESTING: checkCUDACompiler from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:627)
- TESTING: checkCUDAPreprocessor from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:667)
- TESTING: checkCxxCompiler from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:779)
- TESTING: checkCxxPreprocessor from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:817)
- TESTING: checkFortranCompiler from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:934)
- TESTING: checkFortranComments from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:955)
- TESTING: checkLargeFileIO from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1072)
- TESTING: checkArchiver from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1171)
- TESTING: checkSharedLinker from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1283)
- TESTING: checkPIC from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1031)
- TESTING: checkSharedLinkerPaths from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1372)
- TESTING: checkLibC from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1407)
- TESTING: checkDynamicLinker from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1456)
- TESTING: output from config.setCompilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/setCompilers.py:1508)
- TESTING: configureIndexSize from PETSc.options.indexTypes(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/indexTypes.py:31)
- TESTING: checkSharedDynamicPicOptions from PETSc.options.sharedLibraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/sharedLibraries.py:37)
- TESTING: configureSharedLibraries from PETSc.options.sharedLibraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/sharedLibraries.py:53)
- TESTING: configureDynamicLibraries from PETSc.options.sharedLibraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/sharedLibraries.py:96)
- TESTING: configureSerializedFunctions from PETSc.options.sharedLibraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/sharedLibraries.py:102)
- TESTING: configureCompilerFlags from config.compilerFlags(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilerFlags.py:72)
- TESTING: configureDebugging from PETSc.options.debugging(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/debugging.py:25)
- ===============================================================================
- WARNING! Compiling PETSc with no debugging, this should
- only be done for timing and production runs. All development should
- be done when configured using --with-debugging=1
- ===============================================================================
- TESTING: checkRestrict from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:137)
- TESTING: checkCFormatting from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:317)
- TESTING: checkCStaticInline from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:108)
- TESTING: checkDynamicLoadFlag from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:328)
- TESTING: checkCLibraries from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:168)
- TESTING: checkDependencyGenerationFlag from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1359)
- TESTING: checkC99Flag from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1405)
- TESTING: checkRestrict from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:137)
- TESTING: checkCxxNamespace from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:368)
- TESTING: checkCxxOptionalExtensions from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:341)
- TESTING: checkCxxStaticInline from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:122)
- TESTING: checkCxxLibraries from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:426)
- TESTING: checkCxx11 from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:383)
- TESTING: checkFortranTypeSizes from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:589)
- TESTING: checkFortranNameMangling from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:648)
- TESTING: checkFortranNameManglingDouble from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:685)
- TESTING: checkFortranPreprocessor from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:695)
- TESTING: checkFortranDefineCompilerOption from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:719)
- TESTING: checkFortranLibraries from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:739)
- TESTING: checkFortranLinkingCxx from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1093)
- TESTING: checkFortran90 from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1128)
- TESTING: checkFortran2003 from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1141)
- TESTING: checkFortran90Array from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1161)
- TESTING: checkFortranModuleInclude from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1248)
- TESTING: checkFortranModuleOutput from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1314)
- TESTING: setupFrameworkCompilers from config.compilers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/compilers.py:1472)
- TESTING: configureClosure from config.utilities.closure(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/closure.py:18)
- TESTING: configureFortranCPP from PETSc.options.fortranCPP(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/fortranCPP.py:27)
- TESTING: checkStdC from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:105)
- TESTING: checkStat from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:138)
- TESTING: checkSysWait from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:173)
- TESTING: checkTime from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:195)
- TESTING: checkMath from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:203)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: check from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:77)
- TESTING: checkRecursiveMacros from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:218)
- TESTING: configureCacheDetails from config.utilities.cacheDetails(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/cacheDetails.py:78)
- TESTING: check_siginfo_t from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:46)
- TESTING: check__int64 from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:52)
- TESTING: checkSizeTypes from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:58)
- TESTING: checkFileTypes from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:68)
- TESTING: checkIntegerTypes from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:63)
- TESTING: checkPID from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:74)
- TESTING: checkUID from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:78)
- TESTING: checkSignal from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:85)
- TESTING: checkC99Complex from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:106)
- TESTING: checkCxxComplex from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:117)
- TESTING: checkFortranKind from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:138)
- TESTING: checkConst from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:150)
- TESTING: checkEndian from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:206)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkSizeof from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:259)
- TESTING: checkBitsPerByte from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:310)
- TESTING: checkVisibility from config.types(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/types.py:356)
- TESTING: configureMemAlign from PETSc.options.memAlign(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/memAlign.py:30)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkMath from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:251)
- TESTING: checkMathErf from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:267)
- TESTING: checkMathTgamma from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:276)
- TESTING: checkMathFenv from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:285)
- TESTING: checkMathLog2 from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:293)
- TESTING: checkCompression from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:302)
- TESTING: checkRealtime from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:323)
- TESTING: checkDynamic from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:339)
- TESTING: configureLibraryOptions from PETSc.options.libraryOptions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/libraryOptions.py:37)
- TESTING: configureISColorValueType from PETSc.options.libraryOptions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/libraryOptions.py:91)
- TESTING: configureCPURelax from config.atomics(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/atomics.py:17)
- TESTING: configureMemoryBarriers from config.atomics(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/atomics.py:36)
- TESTING: checkMemcmp from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:110)
- TESTING: checkSysinfo from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:135)
- TESTING: checkVPrintf from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:158)
- TESTING: checkVFPrintf from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:165)
- TESTING: checkVSNPrintf from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:172)
- TESTING: checkNanosleep from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:206)
- TESTING: checkSignalHandlerType from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:182)
- TESTING: checkFreeReturnType from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:192)
- TESTING: checkVariableArgumentLists from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:198)
- TESTING: checkClassify from config.functions(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/functions.py:89)
- TESTING: configureMemorySize from config.utilities.getResidentSetSize(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/getResidentSetSize.py:31)
- TESTING: configureFeatureTestMacros from config.utilities.featureTestMacros(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/featureTestMacros.py:13)
- TESTING: configureMissingDefines from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:57)
- TESTING: configureMissingUtypeTypedefs from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:67)
- TESTING: configureMissingFunctions from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:73)
- TESTING: configureMissingSignals from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:93)
- TESTING: configureMissingGetdomainnamePrototype from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:110)
- TESTING: configureMissingSrandPrototype from config.utilities.missing(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/missing.py:135)
- TESTING: configureFPTrap from config.utilities.FPTrap(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/FPTrap.py:27)
- TESTING: configureFortranCommandLine from config.utilities.fortranCommandLine(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/utilities/fortranCommandLine.py:27)
- TESTING: configureMkdir from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:23)
- TESTING: configureAutoreconf from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:45)
- TESTING: configurePrograms from config.programs(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/programs.py:72)
- TESTING: configureMake from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:83)
- TESTING: configureCheckGNUMake from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:120)
- TESTING: configureMakeNP from config.packages.make(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/make.py:158)
- TESTING: alternateConfigureLibrary from config.packages.OpenMPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.MPICH(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:483)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: configureConversion from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:217)
- TESTING: configureMPI2 from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:180)
- TESTING: configureTypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:237)
- TESTING: configureMPITypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:249)
- TESTING: configureMissingPrototypes from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:325)
- TESTING: SGIMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:344)
- TESTING: CxxMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:354)
- TESTING: FortranMPICheck from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:372)
- TESTING: configureIO from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:397)
- TESTING: findMPIInc from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:459)
- TESTING: checkMPICHorOpenMPI from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:434)
- TESTING: checkSharedLibrary from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:130)
- TESTING: configureMPIEXEC from config.packages.MPI(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/MPI.py:143)
- TESTING: alternateConfigureLibrary from config.packages.libjpeg(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.yaml(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.valgrind(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- ===============================================================================
- It appears you do not have valgrind installed on your system.
- We HIGHLY recommend you install it from www.valgrind.org
- Or install valgrind-devel or equivalent using your package manager.
- Then rerun ./configure
- ===============================================================================
- TESTING: alternateConfigureLibrary from config.packages.opengles(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.opengl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.glut(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.Numpy(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/Numpy.py:11)
- TESTING: checkSharedLibrary from config.packages.Numpy(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.petsc4py(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/petsc4py.py:105)
- TESTING: alternateConfigureLibrary from config.packages.mpi4py(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/mpi4py.py:70)
- TESTING: configureLibrary from config.packages.fftw(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.fftw(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.ctetgen(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: locateC2html from config.packages.c2html(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/c2html.py:33)
- TESTING: configureLibrary from config.packages.pthread(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/pthread.py:19)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.pthread(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.ssl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/ssl.py:27)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.ssl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.PARTY(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.tchem(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.cgns(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.tetgen(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.p4est(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.giflib(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.pami(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.papi(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.libpng(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.saws(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Mathematica(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.scientificpython(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/scientificpython.py:46)
- TESTING: checkSharedLibrary from config.packages.scientificpython(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.fiat(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/fiat.py:42)
- TESTING: checkSharedLibrary from config.packages.fiat(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.revolve(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.sprng(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.mpe(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.X(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Triangle(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.boost(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.boost(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.openmp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.PTScotch(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.PTScotch(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: configureLibrary from config.packages.hwloc(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- TESTING: checkInclude from config.headers(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/headers.py:86)
- TESTING: checkSharedLibrary from config.packages.hwloc(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:736)
- TESTING: alternateConfigureLibrary from config.packages.Matlab(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/Matlab.py:35)
- TESTING: alternateConfigureLibrary from config.packages.MatlabEngine(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.Chaco(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.concurrencykit(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.hdf5(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.ascem-io(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.netcdf(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.MOAB(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.exodusii(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.pflotran(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.gmp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.mpfr(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: locateCMake from config.packages.cmake(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/cmake.py:33)
- TESTING: alternateConfigureLibrary from config.packages.unittestcpp(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.alquimia(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureScalarType from PETSc.options.scalarTypes(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/scalarTypes.py:37)
- TESTING: configurePrecision from PETSc.options.scalarTypes(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/PETSc/options/scalarTypes.py:77)
- TESTING: alternateConfigureLibrary from config.packages.opencl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.viennacl(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.fblaslapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: alternateConfigureLibrary from config.packages.f2cblaslapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:333)
- TESTING: checkLib from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:106)
- TESTING: check64BitBLASIndices from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:483)
- TESTING: checkESSL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:400)
- TESTING: checkPESSL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:416)
- TESTING: checkMKL from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:408)
- TESTING: checkMissing from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:441)
- TESTING: checklsame from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:456)
- TESTING: checksdotreturnsdouble from config.packages.BlasLapack(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/packages/BlasLapack.py:518)
- TESTING: alternateConfigureLibrary from config.packages.mkl_cpardiso(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:740)
- TESTING: configureLibrary from config.packages.SuiteSparse(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/package.py:677)
- TESTING: check from config.libraries(/tmp/vsc40023/easybuild_build/PETSc/3.7.3/foss-2016a-Python-2.7.11/petsc-3.7.3/config/BuildSystem/config/libraries.py:146)
- *******************************************************************************
- UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details):
- -------------------------------------------------------------------------------
- --with-suitesparse-lib=['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Lib/libumfpack.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Lib/libklu.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Lib/libcholmod.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Lib/libbtf.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Lib/libccolamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Lib/libcolamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Lib/libcamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Lib/libamd.a', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config/libsuitesparseconfig.a'] and
- --with-suitesparse-include=['/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/UMFPACK/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/KLU/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CHOLMOD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/BTF/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CCOLAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/COLAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/CAMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/AMD/Include', '/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/SuiteSparse/4.5.3-foss-2016a-ParMETIS-4.0.3/SuiteSparse_config'] did not work
- *******************************************************************************
- (at easybuild/tools/run.py:400 in parse_cmd_output)
- == 2016-08-29 14:33:39,008 easyblock.py:2368 WARNING build failed (first 300 chars): cmd " ./configure --prefix=/user/home/gent/vsc400/vsc40023/eb_phanpyscratch/SL6/sandybridge/software/PETSc/3.7.3-foss-2016a-Python-2.7.11 --LIBS="$LIBS" -lrt --with-cc="mpicc" --with-cxx="mpicxx" --with-c++-support --with-fc="mpifort" --CFLAGS="-fPIC -O2 -march=native" --CXXFLAGS="-fPIC -O2 -mar
- == 2016-08-29 14:33:39,008 easyblock.py:269 INFO Closing log for application name PETSc version 3.7.3
Advertisement
Add Comment
Please, Sign In to add comment
Advertisement