make -C shogun
make[1]: Entering directory `/home/kevin/src/shogun/src/shogun'
Generating base/class_list.cpp from base/class_list.cpp.templ by running base/class_list.cpp.py
Compiling base/class_list.cpp.o
Compiling ui/GUIMath.cpp.o
Compiling ui/GUIFeatures.cpp.o
Compiling ui/GUIClassifier.cpp.o
Compiling ui/GUIStructure.cpp.o
Compiling ui/GUITime.cpp.o
Compiling ui/GUIDistance.cpp.o
Compiling ui/SGInterface.cpp.o
Compiling ui/GUILabels.cpp.o
Compiling ui/GUIPreprocessor.cpp.o
Compiling ui/GUIPluginEstimate.cpp.o
Compiling ui/GUIHMM.cpp.o
Compiling ui/GUIConverter.cpp.o
Compiling ui/GUIKernel.cpp.o
Linking object files
Creating static library
make[1]: Leaving directory `/home/kevin/src/shogun/src/shogun'
============================================================
==== Building Shogun for platform Linux-x86_64
==== Compilation options:
==== -fPIC -g -Wall -Wno-unused-parameter -Wformat
==== -Wformat-security -Wparentheses -Wshadow
==== -Wno-unknown-pragmas -Wno-deprecated -O9
==== -fexpensive-optimizations -frerun-cse-after-loop
==== -fcse-follow-jumps -finline-functions -fschedule-insns2
==== -fthread-jumps -fforce-addr -fstrength-reduce
==== -funroll-loops -mfpmath=sse -std=c++11 -frtti -msse2
==== -march=native -mtune=native -pthread
============================================================

make -C interfaces/python_static all &&  make -C interfaces/octave_static all &&  make -C interfaces/r_static all &&  make -C interfaces/octave_modular all &&  make -C interfaces/python_modular all &&  make -C interfaces/r_modular all && true
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/python_static'
Compiling PythonInterface.cpp.o
In file included from /usr/include/python2.7/numpy/ndarraytypes.h:1728:0,
                 from /usr/include/python2.7/numpy/ndarrayobject.h:17,
                 from /usr/include/python2.7/numpy/arrayobject.h:15,
                 from PythonInterface.h:9,
                 from PythonInterface.cpp:1:
/usr/include/python2.7/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
Linking object files
make[1]: Leaving directory `/home/kevin/src/shogun/src/interfaces/python_static'
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/octave_static'
Compiling OctaveInterface.cpp.o
OctaveInterface.cpp: In member function ‘virtual void COctaveInterface::set_string_list(const shogun::SGString<unsigned char>*, int32_t)’:
OctaveInterface.cpp:569:1: warning: ‘dim_vector::dim_vector(octave_idx_type)’ is deprecated (declared at /usr/include/octave-3.6.4/octave/dim-vector.h:157) [-Wdeprecated-declarations]
OctaveInterface.cpp: In member function ‘virtual void COctaveInterface::set_string_list(const shogun::SGString<char>*, int32_t)’:
OctaveInterface.cpp:570:1: warning: ‘dim_vector::dim_vector(octave_idx_type)’ is deprecated (declared at /usr/include/octave-3.6.4/octave/dim-vector.h:157) [-Wdeprecated-declarations]
OctaveInterface.cpp: In member function ‘virtual void COctaveInterface::set_string_list(const shogun::SGString<int>*, int32_t)’:
OctaveInterface.cpp:571:1: warning: ‘dim_vector::dim_vector(octave_idx_type)’ is deprecated (declared at /usr/include/octave-3.6.4/octave/dim-vector.h:157) [-Wdeprecated-declarations]
OctaveInterface.cpp: In member function ‘virtual void COctaveInterface::set_string_list(const shogun::SGString<short int>*, int32_t)’:
OctaveInterface.cpp:572:1: warning: ‘dim_vector::dim_vector(octave_idx_type)’ is deprecated (declared at /usr/include/octave-3.6.4/octave/dim-vector.h:157) [-Wdeprecated-declarations]
OctaveInterface.cpp: In member function ‘virtual void COctaveInterface::set_string_list(const shogun::SGString<short unsigned int>*, int32_t)’:
OctaveInterface.cpp:573:1: warning: ‘dim_vector::dim_vector(octave_idx_type)’ is deprecated (declared at /usr/include/octave-3.6.4/octave/dim-vector.h:157) [-Wdeprecated-declarations]
Linking object files
make[1]: Leaving directory `/home/kevin/src/shogun/src/interfaces/octave_static'
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/r_static'
Compiling RInterface.cpp.o
Linking object files
make[1]: Leaving directory `/home/kevin/src/shogun/src/interfaces/r_static'
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/octave_modular'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/kevin/src/shogun/src/interfaces/octave_modular'
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/python_modular'
make[1]: Nothing to be done for `all'.
make[1]: Leaving directory `/home/kevin/src/shogun/src/interfaces/python_modular'
make[1]: Entering directory `/home/kevin/src/shogun/src/interfaces/r_modular'
modshogun_wrap.cxx.o: In function `R_SWIG_debug_getCallbackFunctionData':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:792: undefined reference to `Rf_allocVector'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:792: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:794: undefined reference to `SET_VECTOR_ELT'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:796: undefined reference to `Rf_unprotect'
modshogun_wrap.cxx.o: In function `R_SWIG_R_pushCallbackFunctionData':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:822: undefined reference to `R_NilValue'
modshogun_wrap.cxx.o: In function `R_SWIG_getCallbackFunctionData':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:830: undefined reference to `Rf_error'
modshogun_wrap.cxx.o: In function `R_SWIG_checkInherits':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:870: undefined reference to `Rf_allocVector'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:870: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:871: undefined reference to `Rf_install'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:871: undefined reference to `SETCAR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:873: undefined reference to `PRINTNAME'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:873: undefined reference to `R_CHAR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:873: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:873: undefined reference to `CDR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:873: undefined reference to `SETCAR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:874: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:874: undefined reference to `CDR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:874: undefined reference to `CDR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:874: undefined reference to `SETCAR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:876: undefined reference to `R_GlobalEnv'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:876: undefined reference to `R_tryEval'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:877: undefined reference to `Rf_unprotect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:882: undefined reference to `LOGICAL'
modshogun_wrap.cxx.o: In function `R_SWIG_resolveExternalRef':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:892: undefined reference to `TYPEOF'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:893: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:893: undefined reference to `R_do_slot'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:896: undefined reference to `TYPEOF'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:897: undefined reference to `Rf_error'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:901: undefined reference to `R_ExternalPtrAddr'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:904: undefined reference to `Rf_error'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:907: undefined reference to `R_ExternalPtrTag'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:907: undefined reference to `Rf_install'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:908: undefined reference to `R_ExternalPtrTag'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:910: undefined reference to `R_ExternalPtrTag'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:910: undefined reference to `PRINTNAME'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:910: undefined reference to `R_CHAR'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:910: undefined reference to `Rf_error'
modshogun_wrap.cxx.o: In function `R_SWIG_ReferenceFinalizer':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:922: undefined reference to `Rf_PrintValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:925: undefined reference to `TYPEOF'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:926: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:926: undefined reference to `R_do_slot'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:928: undefined reference to `TYPEOF'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:929: undefined reference to `R_ClearExternalPtr'
modshogun_wrap.cxx.o: In function `SWIG_MakePtr':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:948: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:948: undefined reference to `Rf_install'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:948: undefined reference to `R_MakeExternalPtr'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:948: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:949: undefined reference to `R_do_MAKE_CLASS'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:949: undefined reference to `R_do_new_object'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:949: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:952: undefined reference to `R_RegisterCFinalizer'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:954: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:954: undefined reference to `R_do_slot_assign'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:955: undefined reference to `SET_S4_OBJECT'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:956: undefined reference to `Rf_unprotect'
modshogun_wrap.cxx.o: In function `R_SWIG_create_SWIG_R_Array':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:968: undefined reference to `R_do_MAKE_CLASS'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:968: undefined reference to `R_do_new_object'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:968: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:969: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:969: undefined reference to `R_do_slot_assign'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:969: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:970: undefined reference to `Rf_ScalarInteger'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:970: undefined reference to `Rf_mkString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:970: undefined reference to `R_do_slot_assign'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:970: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:972: undefined reference to `Rf_unprotect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:973: undefined reference to `SET_S4_OBJECT'
modshogun_wrap.cxx.o: In function `AddOutputArgToReturn':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:982: undefined reference to `SET_VECTOR_ELT'
modshogun_wrap.cxx.o: In function `SWIG_R_NewPointerObj':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:991: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:991: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:991: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:991: undefined reference to `R_MakeExternalPtr'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:991: undefined reference to `R_MakeExternalPtr'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:992: undefined reference to `SET_S4_OBJECT'
modshogun_wrap.cxx.o: In function `SWIG_R_ConvertPtr':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1001: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1006: undefined reference to `R_ExternalPtrAddr'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1009: undefined reference to `R_ExternalPtrTag'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1009: undefined reference to `R_ExternalPtrAddr'
modshogun_wrap.cxx.o: In function `RSwigPacked_New':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1058: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1058: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1058: undefined reference to `R_MakeExternalPtr'
modshogun_wrap.cxx.o: In function `RSwigPacked_UnpackData':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1066: undefined reference to `R_ExternalPtrAddr'
modshogun_wrap.cxx.o: In function `SWIG_R_NewPackedObj':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:1074: undefined reference to `R_NilValue'
modshogun_wrap.cxx.o: In function `SWIG_From_long':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4149: undefined reference to `Rf_ScalarInteger'
modshogun_wrap.cxx.o: In function `SWIG_AsVal_long':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4180: undefined reference to `Rf_asInteger'
modshogun_wrap.cxx.o: In function `SWIG_From_double':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4248: undefined reference to `Rf_ScalarReal'
modshogun_wrap.cxx.o: In function `SWIG_AsVal_double':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4270: undefined reference to `Rf_asReal'
modshogun_wrap.cxx.o: In function `SWIG_AsCharPtrAndSize':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4284: undefined reference to `Rf_isString'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4285: undefined reference to `STRING_ELT'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4285: undefined reference to `R_CHAR'
modshogun_wrap.cxx.o: In function `SWIG_FromCharPtrAndSize':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4328: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4336: undefined reference to `Rf_allocVector'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4336: undefined reference to `Rf_protect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4338: undefined reference to `Rf_mkCharLen'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4343: undefined reference to `SET_STRING_ELT'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4344: undefined reference to `Rf_unprotect'
modshogun_wrap.cxx.o: In function `SWIG_AsVal_unsigned_SS_long':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4495: undefined reference to `Rf_asInteger'
modshogun_wrap.cxx.o: In function `SWIG_From_unsigned_SS_long':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4519: undefined reference to `Rf_ScalarInteger'
modshogun_wrap.cxx.o: In function `R_swig_IntStdVector___nonzero__':
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4754: undefined reference to `R_NilValue'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4755: undefined reference to `vmaxget'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4759: undefined reference to `Rf_warning'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4759: undefined reference to `R_NaInt'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4759: undefined reference to `Rf_ScalarLogical'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4788: undefined reference to `Rf_ScalarLogical'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4790: undefined reference to `vmaxset'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4791: undefined reference to `Rf_unprotect'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4775: undefined reference to `Rf_warning'
/home/kevin/src/shogun/src/interfaces/r_modular/modshogun_wrap.cxx:4775: undefined reference to `R_NaInt'