3610410 [btpool0-25] INFO org.apache.solr.core.SolrCore - [] webapp=/openmrs path=/dataimport params={command=full-import&clean=true} status=0 QTime=181 3610410 [Thread-356] INFO org.apache.solr.handler.dataimport.DataImporter - Starting Full Import 3610738 [Thread-356] WARN org.apache.solr.handler.dataimport.SimplePropertiesWriter - Unable to read: dataimport.properties 3610738 [Thread-356] INFO org.apache.solr.core.SolrCore - [] REMOVING ALL DOCUMENTS FROM INDEX 3610969 [Thread-356] INFO org.apache.solr.core.SolrCore - SolrDeletionPolicy.onInit: commits:num=1 commit{dir=/home/k-joseph/.OpenMRS/solr/data/index,segFN=segments_3,version=1394192336380,generation=3,filenames=[segments_3] 3610969 [Thread-356] INFO org.apache.solr.core.SolrCore - newest commit = 1394192336380 3611009 [Thread-356] INFO org.apache.solr.handler.dataimport.JdbcDataSource - Creating a connection for entity patient_chart with URL: jdbc:mysql://localhost:3306/openmrs?autoReconnect=true&sessionVariables=storage_engine=InnoDB&useUnicode=true&characterEncoding=UTF-8 3611510 [Thread-356] INFO org.apache.solr.handler.dataimport.JdbcDataSource - Time taken for getConnection(): 501 Exception in thread "Thread-9" java.lang.OutOfMemoryError: GC overhead limit exceeded 3713346 [Thread-356] INFO org.apache.solr.update.processor.LogUpdateProcessor - {deleteByQuery=*:*} 0 181 2014-06-04 14:49:05.327::WARN: EXCEPTION 3713346 [Thread-356] ERROR org.apache.solr.handler.dataimport.DataImporter - Full Import failed:java.lang.RuntimeException: java.lang.RuntimeException: org.apache.solr.handler.dataimport.DataImportHandlerException: java.lang.OutOfMemoryError: Java heap space at org.apache.solr.handler.dataimport.DocBuilder.execute(DocBuilder.java:264) at org.apache.solr.handler.dataimport.DataImporter.doFullImport(DataImporter.java:375) at org.apache.solr.handler.dataimport.DataImporter.runCmd(DataImporter.java:445) at org.apache.solr.handler.dataimport.DataImporter$1.run(DataImporter.java:426) Caused by: java.lang.RuntimeException: org.apache.solr.handler.dataimport.DataImportHandlerException: java.lang.OutOfMemoryError: Java heap space at org.apache.solr.handler.dataimport.DocBuilder.buildDocument(DocBuilder.java:621) at org.apache.solr.handler.dataimport.DocBuilder.doFullDump(DocBuilder.java:327) at org.apache.solr.handler.dataimport.DocBuilder.execute(DocBuilder.java:225) ... 3 more Caused by: org.apache.solr.handler.dataimport.DataImportHandlerException: java.lang.OutOfMemoryError: Java heap space at org.apache.solr.handler.dataimport.DocBuilder.buildDocument(DocBuilder.java:759) at org.apache.solr.handler.dataimport.DocBuilder.buildDocument(DocBuilder.java:619) ... 5 more Caused by: java.lang.OutOfMemoryError: Java heap space 3713346 [Thread-356] INFO org.apache.solr.update.UpdateHandler - start rollback java.lang.OutOfMemoryError: Java heap space 3713372 [Thread-356] INFO org.apache.solr.update.UpdateHandler - end_rollback 3713374 [btpool0-25] INFO org.apache.solr.core.SolrCore - [] webapp=/openmrs path=/dataimport params={command=status} status=0 QTime=1 3713375 [btpool0-34] INFO org.apache.solr.core.SolrCore - [] webapp=/openmrs path=/dataimport params={command=status} status=0 QTime=0 3713376 [btpool0-33] INFO org.apache.solr.core.SolrCore - [] webapp=/openmrs path=/dataimport params={command=status} status=0 QTime=0 ERROR - TimerSchedulerTask.run(54) |2014-06-04 14:49:05,407| FATAL ERROR: Task [class org.openmrs.scheduler.tasks.TaskThreadedInitializationWrapper] failed due to exception [java.lang.OutOfMemoryError] java.lang.OutOfMemoryError: Java heap space 3714599 [Thread-356] ERROR org.apache.solr.handler.dataimport.JdbcDataSource - Ignoring Error when closing connection java.sql.SQLException: Unable to open file '��11НетGeneric answer to a question.�'for 'LOAD DATA LOCAL INFILE' command.Due to underlying IOException: ** BEGIN NESTED EXCEPTION ** java.io.FileNotFoundException MESSAGE: ��11НетGeneric answer to a question.� (No such file or directory) STACKTRACE: java.io.FileNotFoundException: ��11НетGeneric answer to a question.� (No such file or directory) at java.io.FileInputStream.open(Native Method) at java.io.FileInputStream.(FileInputStream.java:137) at java.io.FileInputStream.(FileInputStream.java:96) at com.mysql.jdbc.MysqlIO.sendFileToServer(MysqlIO.java:4061) at com.mysql.jdbc.MysqlIO.readResultsForQueryOrUpdate(MysqlIO.java:3243) at com.mysql.jdbc.MysqlIO.readAllResults(MysqlIO.java:2413) at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2836) at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2819) at com.mysql.jdbc.ConnectionImpl.rollbackNoChecks(ConnectionImpl.java:5187) at com.mysql.jdbc.ConnectionImpl.rollback(ConnectionImpl.java:5070) at com.mysql.jdbc.ConnectionImpl.realClose(ConnectionImpl.java:4673) at com.mysql.jdbc.ConnectionImpl.close(ConnectionImpl.java:1640) at org.apache.solr.handler.dataimport.JdbcDataSource.closeConnection(JdbcDataSource.java:401) at org.apache.solr.handler.dataimport.JdbcDataSource.close(JdbcDataSource.java:392) at org.apache.solr.handler.dataimport.DataConfig$Entity.clearCache(DataConfig.java:173) at org.apache.solr.handler.dataimport.DataConfig.clearCaches(DataConfig.java:342) at org.apache.solr.handler.dataimport.DataImporter.doFullImport(DataImporter.java:383) at org.apache.solr.handler.dataimport.DataImporter.runCmd(DataImporter.java:445) at org.apache.solr.handler.dataimport.DataImporter$1.run(DataImporter.java:426) ** END NESTED EXCEPTION ** at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1086) at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:989) at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:975) at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:920) at com.mysql.jdbc.MysqlIO.sendFileToServer(MysqlIO.java:4107) at com.mysql.jdbc.MysqlIO.readResultsForQueryOrUpdate(MysqlIO.java:3243) at com.mysql.jdbc.MysqlIO.readAllResults(MysqlIO.java:2413) at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2836) at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2819) at com.mysql.jdbc.ConnectionImpl.rollbackNoChecks(ConnectionImpl.java:5187) at com.mysql.jdbc.ConnectionImpl.rollback(ConnectionImpl.java:5070) at com.mysql.jdbc.ConnectionImpl.realClose(ConnectionImpl.java:4673) at com.mysql.jdbc.ConnectionImpl.close(ConnectionImpl.java:1640) at org.apache.solr.handler.dataimport.JdbcDataSource.closeConnection(JdbcDataSource.java:401) at org.apache.solr.handler.dataimport.JdbcDataSource.close(JdbcDataSource.java:392) at org.apache.solr.handler.dataimport.DataConfig$Entity.clearCache(DataConfig.java:173) at org.apache.solr.handler.dataimport.DataConfig.clearCaches(DataConfig.java:342) at org.apache.solr.handler.dataimport.DataImporter.doFullImport(DataImporter.java:383) at org.apache.solr.handler.dataimport.DataImporter.runCmd(DataImporter.java:445) at org.apache.solr.handler.dataimport.DataImporter$1.run(DataImporter.java:426)