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- {
- "cells": [
- {
- "cell_type": "code",
- "execution_count": 1,
- "metadata": {
- "collapsed": true
- },
- "outputs": [],
- "source": [
- "import numpy as np\n",
- "import scipy as sp\n",
- "import pandas as pd\n",
- "import matplotlib.pyplot as plt\n",
- "from sklearn import datasets"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 18,
- "metadata": {
- "collapsed": true
- },
- "outputs": [],
- "source": [
- "data = datasets.load_breast_cancer()"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 19,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "array(['mean radius', 'mean texture', 'mean perimeter', 'mean area',\n",
- " 'mean smoothness', 'mean compactness', 'mean concavity',\n",
- " 'mean concave points', 'mean symmetry', 'mean fractal dimension',\n",
- " 'radius error', 'texture error', 'perimeter error', 'area error',\n",
- " 'smoothness error', 'compactness error', 'concavity error',\n",
- " 'concave points error', 'symmetry error', 'fractal dimension error',\n",
- " 'worst radius', 'worst texture', 'worst perimeter', 'worst area',\n",
- " 'worst smoothness', 'worst compactness', 'worst concavity',\n",
- " 'worst concave points', 'worst symmetry', 'worst fractal dimension'],\n",
- " dtype='<U23')"
- ]
- },
- "execution_count": 19,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "data.feature_names"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 47,
- "metadata": {},
- "outputs": [
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- " .dataframe tbody tr th {\n",
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- "</style>\n",
- "<table border=\"1\" class=\"dataframe\">\n",
- " <thead>\n",
- " <tr style=\"text-align: right;\">\n",
- " <th></th>\n",
- " <th>mean radius</th>\n",
- " <th>mean texture</th>\n",
- " <th>mean perimeter</th>\n",
- " <th>mean area</th>\n",
- " <th>mean smoothness</th>\n",
- " <th>mean compactness</th>\n",
- " <th>mean concavity</th>\n",
- " <th>mean concave points</th>\n",
- " <th>mean symmetry</th>\n",
- " <th>mean fractal dimension</th>\n",
- " <th>...</th>\n",
- " <th>worst radius</th>\n",
- " <th>worst texture</th>\n",
- " <th>worst perimeter</th>\n",
- " <th>worst area</th>\n",
- " <th>worst smoothness</th>\n",
- " <th>worst compactness</th>\n",
- " <th>worst concavity</th>\n",
- " <th>worst concave points</th>\n",
- " <th>worst symmetry</th>\n",
- " <th>worst fractal dimension</th>\n",
- " </tr>\n",
- " </thead>\n",
- " <tbody>\n",
- " <tr>\n",
- " <th>count</th>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>...</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " <td>569.000000</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean</th>\n",
- " <td>14.127292</td>\n",
- " <td>19.289649</td>\n",
- " <td>91.969033</td>\n",
- " <td>654.889104</td>\n",
- " <td>0.096360</td>\n",
- " <td>0.104341</td>\n",
- " <td>0.088799</td>\n",
- " <td>0.048919</td>\n",
- " <td>0.181162</td>\n",
- " <td>0.062798</td>\n",
- " <td>...</td>\n",
- " <td>16.269190</td>\n",
- " <td>25.677223</td>\n",
- " <td>107.261213</td>\n",
- " <td>880.583128</td>\n",
- " <td>0.132369</td>\n",
- " <td>0.254265</td>\n",
- " <td>0.272188</td>\n",
- " <td>0.114606</td>\n",
- " <td>0.290076</td>\n",
- " <td>0.083946</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>std</th>\n",
- " <td>3.524049</td>\n",
- " <td>4.301036</td>\n",
- " <td>24.298981</td>\n",
- " <td>351.914129</td>\n",
- " <td>0.014064</td>\n",
- " <td>0.052813</td>\n",
- " <td>0.079720</td>\n",
- " <td>0.038803</td>\n",
- " <td>0.027414</td>\n",
- " <td>0.007060</td>\n",
- " <td>...</td>\n",
- " <td>4.833242</td>\n",
- " <td>6.146258</td>\n",
- " <td>33.602542</td>\n",
- " <td>569.356993</td>\n",
- " <td>0.022832</td>\n",
- " <td>0.157336</td>\n",
- " <td>0.208624</td>\n",
- " <td>0.065732</td>\n",
- " <td>0.061867</td>\n",
- " <td>0.018061</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>min</th>\n",
- " <td>6.981000</td>\n",
- " <td>9.710000</td>\n",
- " <td>43.790000</td>\n",
- " <td>143.500000</td>\n",
- " <td>0.052630</td>\n",
- " <td>0.019380</td>\n",
- " <td>0.000000</td>\n",
- " <td>0.000000</td>\n",
- " <td>0.106000</td>\n",
- " <td>0.049960</td>\n",
- " <td>...</td>\n",
- " <td>7.930000</td>\n",
- " <td>12.020000</td>\n",
- " <td>50.410000</td>\n",
- " <td>185.200000</td>\n",
- " <td>0.071170</td>\n",
- " <td>0.027290</td>\n",
- " <td>0.000000</td>\n",
- " <td>0.000000</td>\n",
- " <td>0.156500</td>\n",
- " <td>0.055040</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>25%</th>\n",
- " <td>11.700000</td>\n",
- " <td>16.170000</td>\n",
- " <td>75.170000</td>\n",
- " <td>420.300000</td>\n",
- " <td>0.086370</td>\n",
- " <td>0.064920</td>\n",
- " <td>0.029560</td>\n",
- " <td>0.020310</td>\n",
- " <td>0.161900</td>\n",
- " <td>0.057700</td>\n",
- " <td>...</td>\n",
- " <td>13.010000</td>\n",
- " <td>21.080000</td>\n",
- " <td>84.110000</td>\n",
- " <td>515.300000</td>\n",
- " <td>0.116600</td>\n",
- " <td>0.147200</td>\n",
- " <td>0.114500</td>\n",
- " <td>0.064930</td>\n",
- " <td>0.250400</td>\n",
- " <td>0.071460</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>50%</th>\n",
- " <td>13.370000</td>\n",
- " <td>18.840000</td>\n",
- " <td>86.240000</td>\n",
- " <td>551.100000</td>\n",
- " <td>0.095870</td>\n",
- " <td>0.092630</td>\n",
- " <td>0.061540</td>\n",
- " <td>0.033500</td>\n",
- " <td>0.179200</td>\n",
- " <td>0.061540</td>\n",
- " <td>...</td>\n",
- " <td>14.970000</td>\n",
- " <td>25.410000</td>\n",
- " <td>97.660000</td>\n",
- " <td>686.500000</td>\n",
- " <td>0.131300</td>\n",
- " <td>0.211900</td>\n",
- " <td>0.226700</td>\n",
- " <td>0.099930</td>\n",
- " <td>0.282200</td>\n",
- " <td>0.080040</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>75%</th>\n",
- " <td>15.780000</td>\n",
- " <td>21.800000</td>\n",
- " <td>104.100000</td>\n",
- " <td>782.700000</td>\n",
- " <td>0.105300</td>\n",
- " <td>0.130400</td>\n",
- " <td>0.130700</td>\n",
- " <td>0.074000</td>\n",
- " <td>0.195700</td>\n",
- " <td>0.066120</td>\n",
- " <td>...</td>\n",
- " <td>18.790000</td>\n",
- " <td>29.720000</td>\n",
- " <td>125.400000</td>\n",
- " <td>1084.000000</td>\n",
- " <td>0.146000</td>\n",
- " <td>0.339100</td>\n",
- " <td>0.382900</td>\n",
- " <td>0.161400</td>\n",
- " <td>0.317900</td>\n",
- " <td>0.092080</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>max</th>\n",
- " <td>28.110000</td>\n",
- " <td>39.280000</td>\n",
- " <td>188.500000</td>\n",
- " <td>2501.000000</td>\n",
- " <td>0.163400</td>\n",
- " <td>0.345400</td>\n",
- " <td>0.426800</td>\n",
- " <td>0.201200</td>\n",
- " <td>0.304000</td>\n",
- " <td>0.097440</td>\n",
- " <td>...</td>\n",
- " <td>36.040000</td>\n",
- " <td>49.540000</td>\n",
- " <td>251.200000</td>\n",
- " <td>4254.000000</td>\n",
- " <td>0.222600</td>\n",
- " <td>1.058000</td>\n",
- " <td>1.252000</td>\n",
- " <td>0.291000</td>\n",
- " <td>0.663800</td>\n",
- " <td>0.207500</td>\n",
- " </tr>\n",
- " </tbody>\n",
- "</table>\n",
- "<p>8 rows × 30 columns</p>\n",
- "</div>"
- ],
- "text/plain": [
- " mean radius mean texture mean perimeter mean area \\\n",
- "count 569.000000 569.000000 569.000000 569.000000 \n",
- "mean 14.127292 19.289649 91.969033 654.889104 \n",
- "std 3.524049 4.301036 24.298981 351.914129 \n",
- "min 6.981000 9.710000 43.790000 143.500000 \n",
- "25% 11.700000 16.170000 75.170000 420.300000 \n",
- "50% 13.370000 18.840000 86.240000 551.100000 \n",
- "75% 15.780000 21.800000 104.100000 782.700000 \n",
- "max 28.110000 39.280000 188.500000 2501.000000 \n",
- "\n",
- " mean smoothness mean compactness mean concavity mean concave points \\\n",
- "count 569.000000 569.000000 569.000000 569.000000 \n",
- "mean 0.096360 0.104341 0.088799 0.048919 \n",
- "std 0.014064 0.052813 0.079720 0.038803 \n",
- "min 0.052630 0.019380 0.000000 0.000000 \n",
- "25% 0.086370 0.064920 0.029560 0.020310 \n",
- "50% 0.095870 0.092630 0.061540 0.033500 \n",
- "75% 0.105300 0.130400 0.130700 0.074000 \n",
- "max 0.163400 0.345400 0.426800 0.201200 \n",
- "\n",
- " mean symmetry mean fractal dimension ... \\\n",
- "count 569.000000 569.000000 ... \n",
- "mean 0.181162 0.062798 ... \n",
- "std 0.027414 0.007060 ... \n",
- "min 0.106000 0.049960 ... \n",
- "25% 0.161900 0.057700 ... \n",
- "50% 0.179200 0.061540 ... \n",
- "75% 0.195700 0.066120 ... \n",
- "max 0.304000 0.097440 ... \n",
- "\n",
- " worst radius worst texture worst perimeter worst area \\\n",
- "count 569.000000 569.000000 569.000000 569.000000 \n",
- "mean 16.269190 25.677223 107.261213 880.583128 \n",
- "std 4.833242 6.146258 33.602542 569.356993 \n",
- "min 7.930000 12.020000 50.410000 185.200000 \n",
- "25% 13.010000 21.080000 84.110000 515.300000 \n",
- "50% 14.970000 25.410000 97.660000 686.500000 \n",
- "75% 18.790000 29.720000 125.400000 1084.000000 \n",
- "max 36.040000 49.540000 251.200000 4254.000000 \n",
- "\n",
- " worst smoothness worst compactness worst concavity \\\n",
- "count 569.000000 569.000000 569.000000 \n",
- "mean 0.132369 0.254265 0.272188 \n",
- "std 0.022832 0.157336 0.208624 \n",
- "min 0.071170 0.027290 0.000000 \n",
- "25% 0.116600 0.147200 0.114500 \n",
- "50% 0.131300 0.211900 0.226700 \n",
- "75% 0.146000 0.339100 0.382900 \n",
- "max 0.222600 1.058000 1.252000 \n",
- "\n",
- " worst concave points worst symmetry worst fractal dimension \n",
- "count 569.000000 569.000000 569.000000 \n",
- "mean 0.114606 0.290076 0.083946 \n",
- "std 0.065732 0.061867 0.018061 \n",
- "min 0.000000 0.156500 0.055040 \n",
- "25% 0.064930 0.250400 0.071460 \n",
- "50% 0.099930 0.282200 0.080040 \n",
- "75% 0.161400 0.317900 0.092080 \n",
- "max 0.291000 0.663800 0.207500 \n",
- "\n",
- "[8 rows x 30 columns]"
- ]
- },
- "execution_count": 47,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "df = pd.DataFrame(data.data)\n",
- "df.columns = data.feature_names\n",
- "df.describe()"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 22,
- "metadata": {},
- "outputs": [
- {
- "data": {
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- "<table border=\"1\" class=\"dataframe\">\n",
- " <thead>\n",
- " <tr style=\"text-align: right;\">\n",
- " <th></th>\n",
- " <th>mean radius</th>\n",
- " <th>mean texture</th>\n",
- " <th>mean perimeter</th>\n",
- " <th>mean area</th>\n",
- " <th>mean smoothness</th>\n",
- " <th>mean compactness</th>\n",
- " <th>mean concavity</th>\n",
- " <th>mean concave points</th>\n",
- " <th>mean symmetry</th>\n",
- " <th>mean fractal dimension</th>\n",
- " <th>...</th>\n",
- " <th>worst radius</th>\n",
- " <th>worst texture</th>\n",
- " <th>worst perimeter</th>\n",
- " <th>worst area</th>\n",
- " <th>worst smoothness</th>\n",
- " <th>worst compactness</th>\n",
- " <th>worst concavity</th>\n",
- " <th>worst concave points</th>\n",
- " <th>worst symmetry</th>\n",
- " <th>worst fractal dimension</th>\n",
- " </tr>\n",
- " </thead>\n",
- " <tbody>\n",
- " <tr>\n",
- " <th>mean radius</th>\n",
- " <td>1.000000</td>\n",
- " <td>0.323782</td>\n",
- " <td>0.997855</td>\n",
- " <td>0.987357</td>\n",
- " <td>0.170581</td>\n",
- " <td>0.506124</td>\n",
- " <td>0.676764</td>\n",
- " <td>0.822529</td>\n",
- " <td>0.147741</td>\n",
- " <td>-0.311631</td>\n",
- " <td>...</td>\n",
- " <td>0.969539</td>\n",
- " <td>0.297008</td>\n",
- " <td>0.965137</td>\n",
- " <td>0.941082</td>\n",
- " <td>0.119616</td>\n",
- " <td>0.413463</td>\n",
- " <td>0.526911</td>\n",
- " <td>0.744214</td>\n",
- " <td>0.163953</td>\n",
- " <td>0.007066</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean texture</th>\n",
- " <td>0.323782</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.329533</td>\n",
- " <td>0.321086</td>\n",
- " <td>-0.023389</td>\n",
- " <td>0.236702</td>\n",
- " <td>0.302418</td>\n",
- " <td>0.293464</td>\n",
- " <td>0.071401</td>\n",
- " <td>-0.076437</td>\n",
- " <td>...</td>\n",
- " <td>0.352573</td>\n",
- " <td>0.912045</td>\n",
- " <td>0.358040</td>\n",
- " <td>0.343546</td>\n",
- " <td>0.077503</td>\n",
- " <td>0.277830</td>\n",
- " <td>0.301025</td>\n",
- " <td>0.295316</td>\n",
- " <td>0.105008</td>\n",
- " <td>0.119205</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean perimeter</th>\n",
- " <td>0.997855</td>\n",
- " <td>0.329533</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.986507</td>\n",
- " <td>0.207278</td>\n",
- " <td>0.556936</td>\n",
- " <td>0.716136</td>\n",
- " <td>0.850977</td>\n",
- " <td>0.183027</td>\n",
- " <td>-0.261477</td>\n",
- " <td>...</td>\n",
- " <td>0.969476</td>\n",
- " <td>0.303038</td>\n",
- " <td>0.970387</td>\n",
- " <td>0.941550</td>\n",
- " <td>0.150549</td>\n",
- " <td>0.455774</td>\n",
- " <td>0.563879</td>\n",
- " <td>0.771241</td>\n",
- " <td>0.189115</td>\n",
- " <td>0.051019</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean area</th>\n",
- " <td>0.987357</td>\n",
- " <td>0.321086</td>\n",
- " <td>0.986507</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.177028</td>\n",
- " <td>0.498502</td>\n",
- " <td>0.685983</td>\n",
- " <td>0.823269</td>\n",
- " <td>0.151293</td>\n",
- " <td>-0.283110</td>\n",
- " <td>...</td>\n",
- " <td>0.962746</td>\n",
- " <td>0.287489</td>\n",
- " <td>0.959120</td>\n",
- " <td>0.959213</td>\n",
- " <td>0.123523</td>\n",
- " <td>0.390410</td>\n",
- " <td>0.512606</td>\n",
- " <td>0.722017</td>\n",
- " <td>0.143570</td>\n",
- " <td>0.003738</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean smoothness</th>\n",
- " <td>0.170581</td>\n",
- " <td>-0.023389</td>\n",
- " <td>0.207278</td>\n",
- " <td>0.177028</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.659123</td>\n",
- " <td>0.521984</td>\n",
- " <td>0.553695</td>\n",
- " <td>0.557775</td>\n",
- " <td>0.584792</td>\n",
- " <td>...</td>\n",
- " <td>0.213120</td>\n",
- " <td>0.036072</td>\n",
- " <td>0.238853</td>\n",
- " <td>0.206718</td>\n",
- " <td>0.805324</td>\n",
- " <td>0.472468</td>\n",
- " <td>0.434926</td>\n",
- " <td>0.503053</td>\n",
- " <td>0.394309</td>\n",
- " <td>0.499316</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean compactness</th>\n",
- " <td>0.506124</td>\n",
- " <td>0.236702</td>\n",
- " <td>0.556936</td>\n",
- " <td>0.498502</td>\n",
- " <td>0.659123</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.883121</td>\n",
- " <td>0.831135</td>\n",
- " <td>0.602641</td>\n",
- " <td>0.565369</td>\n",
- " <td>...</td>\n",
- " <td>0.535315</td>\n",
- " <td>0.248133</td>\n",
- " <td>0.590210</td>\n",
- " <td>0.509604</td>\n",
- " <td>0.565541</td>\n",
- " <td>0.865809</td>\n",
- " <td>0.816275</td>\n",
- " <td>0.815573</td>\n",
- " <td>0.510223</td>\n",
- " <td>0.687382</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean concavity</th>\n",
- " <td>0.676764</td>\n",
- " <td>0.302418</td>\n",
- " <td>0.716136</td>\n",
- " <td>0.685983</td>\n",
- " <td>0.521984</td>\n",
- " <td>0.883121</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.921391</td>\n",
- " <td>0.500667</td>\n",
- " <td>0.336783</td>\n",
- " <td>...</td>\n",
- " <td>0.688236</td>\n",
- " <td>0.299879</td>\n",
- " <td>0.729565</td>\n",
- " <td>0.675987</td>\n",
- " <td>0.448822</td>\n",
- " <td>0.754968</td>\n",
- " <td>0.884103</td>\n",
- " <td>0.861323</td>\n",
- " <td>0.409464</td>\n",
- " <td>0.514930</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean concave points</th>\n",
- " <td>0.822529</td>\n",
- " <td>0.293464</td>\n",
- " <td>0.850977</td>\n",
- " <td>0.823269</td>\n",
- " <td>0.553695</td>\n",
- " <td>0.831135</td>\n",
- " <td>0.921391</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.462497</td>\n",
- " <td>0.166917</td>\n",
- " <td>...</td>\n",
- " <td>0.830318</td>\n",
- " <td>0.292752</td>\n",
- " <td>0.855923</td>\n",
- " <td>0.809630</td>\n",
- " <td>0.452753</td>\n",
- " <td>0.667454</td>\n",
- " <td>0.752399</td>\n",
- " <td>0.910155</td>\n",
- " <td>0.375744</td>\n",
- " <td>0.368661</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean symmetry</th>\n",
- " <td>0.147741</td>\n",
- " <td>0.071401</td>\n",
- " <td>0.183027</td>\n",
- " <td>0.151293</td>\n",
- " <td>0.557775</td>\n",
- " <td>0.602641</td>\n",
- " <td>0.500667</td>\n",
- " <td>0.462497</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.479921</td>\n",
- " <td>...</td>\n",
- " <td>0.185728</td>\n",
- " <td>0.090651</td>\n",
- " <td>0.219169</td>\n",
- " <td>0.177193</td>\n",
- " <td>0.426675</td>\n",
- " <td>0.473200</td>\n",
- " <td>0.433721</td>\n",
- " <td>0.430297</td>\n",
- " <td>0.699826</td>\n",
- " <td>0.438413</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>mean fractal dimension</th>\n",
- " <td>-0.311631</td>\n",
- " <td>-0.076437</td>\n",
- " <td>-0.261477</td>\n",
- " <td>-0.283110</td>\n",
- " <td>0.584792</td>\n",
- " <td>0.565369</td>\n",
- " <td>0.336783</td>\n",
- " <td>0.166917</td>\n",
- " <td>0.479921</td>\n",
- " <td>1.000000</td>\n",
- " <td>...</td>\n",
- " <td>-0.253691</td>\n",
- " <td>-0.051269</td>\n",
- " <td>-0.205151</td>\n",
- " <td>-0.231854</td>\n",
- " <td>0.504942</td>\n",
- " <td>0.458798</td>\n",
- " <td>0.346234</td>\n",
- " <td>0.175325</td>\n",
- " <td>0.334019</td>\n",
- " <td>0.767297</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>radius error</th>\n",
- " <td>0.679090</td>\n",
- " <td>0.275869</td>\n",
- " <td>0.691765</td>\n",
- " <td>0.732562</td>\n",
- " <td>0.301467</td>\n",
- " <td>0.497473</td>\n",
- " <td>0.631925</td>\n",
- " <td>0.698050</td>\n",
- " <td>0.303379</td>\n",
- " <td>0.000111</td>\n",
- " <td>...</td>\n",
- " <td>0.715065</td>\n",
- " <td>0.194799</td>\n",
- " <td>0.719684</td>\n",
- " <td>0.751548</td>\n",
- " <td>0.141919</td>\n",
- " <td>0.287103</td>\n",
- " <td>0.380585</td>\n",
- " <td>0.531062</td>\n",
- " <td>0.094543</td>\n",
- " <td>0.049559</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>texture error</th>\n",
- " <td>-0.097317</td>\n",
- " <td>0.386358</td>\n",
- " <td>-0.086761</td>\n",
- " <td>-0.066280</td>\n",
- " <td>0.068406</td>\n",
- " <td>0.046205</td>\n",
- " <td>0.076218</td>\n",
- " <td>0.021480</td>\n",
- " <td>0.128053</td>\n",
- " <td>0.164174</td>\n",
- " <td>...</td>\n",
- " <td>-0.111690</td>\n",
- " <td>0.409003</td>\n",
- " <td>-0.102242</td>\n",
- " <td>-0.083195</td>\n",
- " <td>-0.073658</td>\n",
- " <td>-0.092439</td>\n",
- " <td>-0.068956</td>\n",
- " <td>-0.119638</td>\n",
- " <td>-0.128215</td>\n",
- " <td>-0.045655</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>perimeter error</th>\n",
- " <td>0.674172</td>\n",
- " <td>0.281673</td>\n",
- " <td>0.693135</td>\n",
- " <td>0.726628</td>\n",
- " <td>0.296092</td>\n",
- " <td>0.548905</td>\n",
- " <td>0.660391</td>\n",
- " <td>0.710650</td>\n",
- " <td>0.313893</td>\n",
- " <td>0.039830</td>\n",
- " <td>...</td>\n",
- " <td>0.697201</td>\n",
- " <td>0.200371</td>\n",
- " <td>0.721031</td>\n",
- " <td>0.730713</td>\n",
- " <td>0.130054</td>\n",
- " <td>0.341919</td>\n",
- " <td>0.418899</td>\n",
- " <td>0.554897</td>\n",
- " <td>0.109930</td>\n",
- " <td>0.085433</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>area error</th>\n",
- " <td>0.735864</td>\n",
- " <td>0.259845</td>\n",
- " <td>0.744983</td>\n",
- " <td>0.800086</td>\n",
- " <td>0.246552</td>\n",
- " <td>0.455653</td>\n",
- " <td>0.617427</td>\n",
- " <td>0.690299</td>\n",
- " <td>0.223970</td>\n",
- " <td>-0.090170</td>\n",
- " <td>...</td>\n",
- " <td>0.757373</td>\n",
- " <td>0.196497</td>\n",
- " <td>0.761213</td>\n",
- " <td>0.811408</td>\n",
- " <td>0.125389</td>\n",
- " <td>0.283257</td>\n",
- " <td>0.385100</td>\n",
- " <td>0.538166</td>\n",
- " <td>0.074126</td>\n",
- " <td>0.017539</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>smoothness error</th>\n",
- " <td>-0.222600</td>\n",
- " <td>0.006614</td>\n",
- " <td>-0.202694</td>\n",
- " <td>-0.166777</td>\n",
- " <td>0.332375</td>\n",
- " <td>0.135299</td>\n",
- " <td>0.098564</td>\n",
- " <td>0.027653</td>\n",
- " <td>0.187321</td>\n",
- " <td>0.401964</td>\n",
- " <td>...</td>\n",
- " <td>-0.230691</td>\n",
- " <td>-0.074743</td>\n",
- " <td>-0.217304</td>\n",
- " <td>-0.182195</td>\n",
- " <td>0.314457</td>\n",
- " <td>-0.055558</td>\n",
- " <td>-0.058298</td>\n",
- " <td>-0.102007</td>\n",
- " <td>-0.107342</td>\n",
- " <td>0.101480</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>compactness error</th>\n",
- " <td>0.206000</td>\n",
- " <td>0.191975</td>\n",
- " <td>0.250744</td>\n",
- " <td>0.212583</td>\n",
- " <td>0.318943</td>\n",
- " <td>0.738722</td>\n",
- " <td>0.670279</td>\n",
- " <td>0.490424</td>\n",
- " <td>0.421659</td>\n",
- " <td>0.559837</td>\n",
- " <td>...</td>\n",
- " <td>0.204607</td>\n",
- " <td>0.143003</td>\n",
- " <td>0.260516</td>\n",
- " <td>0.199371</td>\n",
- " <td>0.227394</td>\n",
- " <td>0.678780</td>\n",
- " <td>0.639147</td>\n",
- " <td>0.483208</td>\n",
- " <td>0.277878</td>\n",
- " <td>0.590973</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>concavity error</th>\n",
- " <td>0.194204</td>\n",
- " <td>0.143293</td>\n",
- " <td>0.228082</td>\n",
- " <td>0.207660</td>\n",
- " <td>0.248396</td>\n",
- " <td>0.570517</td>\n",
- " <td>0.691270</td>\n",
- " <td>0.439167</td>\n",
- " <td>0.342627</td>\n",
- " <td>0.446630</td>\n",
- " <td>...</td>\n",
- " <td>0.186904</td>\n",
- " <td>0.100241</td>\n",
- " <td>0.226680</td>\n",
- " <td>0.188353</td>\n",
- " <td>0.168481</td>\n",
- " <td>0.484858</td>\n",
- " <td>0.662564</td>\n",
- " <td>0.440472</td>\n",
- " <td>0.197788</td>\n",
- " <td>0.439329</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>concave points error</th>\n",
- " <td>0.376169</td>\n",
- " <td>0.163851</td>\n",
- " <td>0.407217</td>\n",
- " <td>0.372320</td>\n",
- " <td>0.380676</td>\n",
- " <td>0.642262</td>\n",
- " <td>0.683260</td>\n",
- " <td>0.615634</td>\n",
- " <td>0.393298</td>\n",
- " <td>0.341198</td>\n",
- " <td>...</td>\n",
- " <td>0.358127</td>\n",
- " <td>0.086741</td>\n",
- " <td>0.394999</td>\n",
- " <td>0.342271</td>\n",
- " <td>0.215351</td>\n",
- " <td>0.452888</td>\n",
- " <td>0.549592</td>\n",
- " <td>0.602450</td>\n",
- " <td>0.143116</td>\n",
- " <td>0.310655</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>symmetry error</th>\n",
- " <td>-0.104321</td>\n",
- " <td>0.009127</td>\n",
- " <td>-0.081629</td>\n",
- " <td>-0.072497</td>\n",
- " <td>0.200774</td>\n",
- " <td>0.229977</td>\n",
- " <td>0.178009</td>\n",
- " <td>0.095351</td>\n",
- " <td>0.449137</td>\n",
- " <td>0.345007</td>\n",
- " <td>...</td>\n",
- " <td>-0.128121</td>\n",
- " <td>-0.077473</td>\n",
- " <td>-0.103753</td>\n",
- " <td>-0.110343</td>\n",
- " <td>-0.012662</td>\n",
- " <td>0.060255</td>\n",
- " <td>0.037119</td>\n",
- " <td>-0.030413</td>\n",
- " <td>0.389402</td>\n",
- " <td>0.078079</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>fractal dimension error</th>\n",
- " <td>-0.042641</td>\n",
- " <td>0.054458</td>\n",
- " <td>-0.005523</td>\n",
- " <td>-0.019887</td>\n",
- " <td>0.283607</td>\n",
- " <td>0.507318</td>\n",
- " <td>0.449301</td>\n",
- " <td>0.257584</td>\n",
- " <td>0.331786</td>\n",
- " <td>0.688132</td>\n",
- " <td>...</td>\n",
- " <td>-0.037488</td>\n",
- " <td>-0.003195</td>\n",
- " <td>-0.001000</td>\n",
- " <td>-0.022736</td>\n",
- " <td>0.170568</td>\n",
- " <td>0.390159</td>\n",
- " <td>0.379975</td>\n",
- " <td>0.215204</td>\n",
- " <td>0.111094</td>\n",
- " <td>0.591328</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst radius</th>\n",
- " <td>0.969539</td>\n",
- " <td>0.352573</td>\n",
- " <td>0.969476</td>\n",
- " <td>0.962746</td>\n",
- " <td>0.213120</td>\n",
- " <td>0.535315</td>\n",
- " <td>0.688236</td>\n",
- " <td>0.830318</td>\n",
- " <td>0.185728</td>\n",
- " <td>-0.253691</td>\n",
- " <td>...</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.359921</td>\n",
- " <td>0.993708</td>\n",
- " <td>0.984015</td>\n",
- " <td>0.216574</td>\n",
- " <td>0.475820</td>\n",
- " <td>0.573975</td>\n",
- " <td>0.787424</td>\n",
- " <td>0.243529</td>\n",
- " <td>0.093492</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst texture</th>\n",
- " <td>0.297008</td>\n",
- " <td>0.912045</td>\n",
- " <td>0.303038</td>\n",
- " <td>0.287489</td>\n",
- " <td>0.036072</td>\n",
- " <td>0.248133</td>\n",
- " <td>0.299879</td>\n",
- " <td>0.292752</td>\n",
- " <td>0.090651</td>\n",
- " <td>-0.051269</td>\n",
- " <td>...</td>\n",
- " <td>0.359921</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.365098</td>\n",
- " <td>0.345842</td>\n",
- " <td>0.225429</td>\n",
- " <td>0.360832</td>\n",
- " <td>0.368366</td>\n",
- " <td>0.359755</td>\n",
- " <td>0.233027</td>\n",
- " <td>0.219122</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst perimeter</th>\n",
- " <td>0.965137</td>\n",
- " <td>0.358040</td>\n",
- " <td>0.970387</td>\n",
- " <td>0.959120</td>\n",
- " <td>0.238853</td>\n",
- " <td>0.590210</td>\n",
- " <td>0.729565</td>\n",
- " <td>0.855923</td>\n",
- " <td>0.219169</td>\n",
- " <td>-0.205151</td>\n",
- " <td>...</td>\n",
- " <td>0.993708</td>\n",
- " <td>0.365098</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.977578</td>\n",
- " <td>0.236775</td>\n",
- " <td>0.529408</td>\n",
- " <td>0.618344</td>\n",
- " <td>0.816322</td>\n",
- " <td>0.269493</td>\n",
- " <td>0.138957</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst area</th>\n",
- " <td>0.941082</td>\n",
- " <td>0.343546</td>\n",
- " <td>0.941550</td>\n",
- " <td>0.959213</td>\n",
- " <td>0.206718</td>\n",
- " <td>0.509604</td>\n",
- " <td>0.675987</td>\n",
- " <td>0.809630</td>\n",
- " <td>0.177193</td>\n",
- " <td>-0.231854</td>\n",
- " <td>...</td>\n",
- " <td>0.984015</td>\n",
- " <td>0.345842</td>\n",
- " <td>0.977578</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.209145</td>\n",
- " <td>0.438296</td>\n",
- " <td>0.543331</td>\n",
- " <td>0.747419</td>\n",
- " <td>0.209146</td>\n",
- " <td>0.079647</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst smoothness</th>\n",
- " <td>0.119616</td>\n",
- " <td>0.077503</td>\n",
- " <td>0.150549</td>\n",
- " <td>0.123523</td>\n",
- " <td>0.805324</td>\n",
- " <td>0.565541</td>\n",
- " <td>0.448822</td>\n",
- " <td>0.452753</td>\n",
- " <td>0.426675</td>\n",
- " <td>0.504942</td>\n",
- " <td>...</td>\n",
- " <td>0.216574</td>\n",
- " <td>0.225429</td>\n",
- " <td>0.236775</td>\n",
- " <td>0.209145</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.568187</td>\n",
- " <td>0.518523</td>\n",
- " <td>0.547691</td>\n",
- " <td>0.493838</td>\n",
- " <td>0.617624</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst compactness</th>\n",
- " <td>0.413463</td>\n",
- " <td>0.277830</td>\n",
- " <td>0.455774</td>\n",
- " <td>0.390410</td>\n",
- " <td>0.472468</td>\n",
- " <td>0.865809</td>\n",
- " <td>0.754968</td>\n",
- " <td>0.667454</td>\n",
- " <td>0.473200</td>\n",
- " <td>0.458798</td>\n",
- " <td>...</td>\n",
- " <td>0.475820</td>\n",
- " <td>0.360832</td>\n",
- " <td>0.529408</td>\n",
- " <td>0.438296</td>\n",
- " <td>0.568187</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.892261</td>\n",
- " <td>0.801080</td>\n",
- " <td>0.614441</td>\n",
- " <td>0.810455</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst concavity</th>\n",
- " <td>0.526911</td>\n",
- " <td>0.301025</td>\n",
- " <td>0.563879</td>\n",
- " <td>0.512606</td>\n",
- " <td>0.434926</td>\n",
- " <td>0.816275</td>\n",
- " <td>0.884103</td>\n",
- " <td>0.752399</td>\n",
- " <td>0.433721</td>\n",
- " <td>0.346234</td>\n",
- " <td>...</td>\n",
- " <td>0.573975</td>\n",
- " <td>0.368366</td>\n",
- " <td>0.618344</td>\n",
- " <td>0.543331</td>\n",
- " <td>0.518523</td>\n",
- " <td>0.892261</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.855434</td>\n",
- " <td>0.532520</td>\n",
- " <td>0.686511</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst concave points</th>\n",
- " <td>0.744214</td>\n",
- " <td>0.295316</td>\n",
- " <td>0.771241</td>\n",
- " <td>0.722017</td>\n",
- " <td>0.503053</td>\n",
- " <td>0.815573</td>\n",
- " <td>0.861323</td>\n",
- " <td>0.910155</td>\n",
- " <td>0.430297</td>\n",
- " <td>0.175325</td>\n",
- " <td>...</td>\n",
- " <td>0.787424</td>\n",
- " <td>0.359755</td>\n",
- " <td>0.816322</td>\n",
- " <td>0.747419</td>\n",
- " <td>0.547691</td>\n",
- " <td>0.801080</td>\n",
- " <td>0.855434</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.502528</td>\n",
- " <td>0.511114</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst symmetry</th>\n",
- " <td>0.163953</td>\n",
- " <td>0.105008</td>\n",
- " <td>0.189115</td>\n",
- " <td>0.143570</td>\n",
- " <td>0.394309</td>\n",
- " <td>0.510223</td>\n",
- " <td>0.409464</td>\n",
- " <td>0.375744</td>\n",
- " <td>0.699826</td>\n",
- " <td>0.334019</td>\n",
- " <td>...</td>\n",
- " <td>0.243529</td>\n",
- " <td>0.233027</td>\n",
- " <td>0.269493</td>\n",
- " <td>0.209146</td>\n",
- " <td>0.493838</td>\n",
- " <td>0.614441</td>\n",
- " <td>0.532520</td>\n",
- " <td>0.502528</td>\n",
- " <td>1.000000</td>\n",
- " <td>0.537848</td>\n",
- " </tr>\n",
- " <tr>\n",
- " <th>worst fractal dimension</th>\n",
- " <td>0.007066</td>\n",
- " <td>0.119205</td>\n",
- " <td>0.051019</td>\n",
- " <td>0.003738</td>\n",
- " <td>0.499316</td>\n",
- " <td>0.687382</td>\n",
- " <td>0.514930</td>\n",
- " <td>0.368661</td>\n",
- " <td>0.438413</td>\n",
- " <td>0.767297</td>\n",
- " <td>...</td>\n",
- " <td>0.093492</td>\n",
- " <td>0.219122</td>\n",
- " <td>0.138957</td>\n",
- " <td>0.079647</td>\n",
- " <td>0.617624</td>\n",
- " <td>0.810455</td>\n",
- " <td>0.686511</td>\n",
- " <td>0.511114</td>\n",
- " <td>0.537848</td>\n",
- " <td>1.000000</td>\n",
- " </tr>\n",
- " </tbody>\n",
- "</table>\n",
- "<p>30 rows × 30 columns</p>\n",
- "</div>"
- ],
- "text/plain": [
- " mean radius mean texture mean perimeter mean area \\\n",
- "mean radius 1.000000 0.323782 0.997855 0.987357 \n",
- "mean texture 0.323782 1.000000 0.329533 0.321086 \n",
- "mean perimeter 0.997855 0.329533 1.000000 0.986507 \n",
- "mean area 0.987357 0.321086 0.986507 1.000000 \n",
- "mean smoothness 0.170581 -0.023389 0.207278 0.177028 \n",
- "mean compactness 0.506124 0.236702 0.556936 0.498502 \n",
- "mean concavity 0.676764 0.302418 0.716136 0.685983 \n",
- "mean concave points 0.822529 0.293464 0.850977 0.823269 \n",
- "mean symmetry 0.147741 0.071401 0.183027 0.151293 \n",
- "mean fractal dimension -0.311631 -0.076437 -0.261477 -0.283110 \n",
- "radius error 0.679090 0.275869 0.691765 0.732562 \n",
- "texture error -0.097317 0.386358 -0.086761 -0.066280 \n",
- "perimeter error 0.674172 0.281673 0.693135 0.726628 \n",
- "area error 0.735864 0.259845 0.744983 0.800086 \n",
- "smoothness error -0.222600 0.006614 -0.202694 -0.166777 \n",
- "compactness error 0.206000 0.191975 0.250744 0.212583 \n",
- "concavity error 0.194204 0.143293 0.228082 0.207660 \n",
- "concave points error 0.376169 0.163851 0.407217 0.372320 \n",
- "symmetry error -0.104321 0.009127 -0.081629 -0.072497 \n",
- "fractal dimension error -0.042641 0.054458 -0.005523 -0.019887 \n",
- "worst radius 0.969539 0.352573 0.969476 0.962746 \n",
- "worst texture 0.297008 0.912045 0.303038 0.287489 \n",
- "worst perimeter 0.965137 0.358040 0.970387 0.959120 \n",
- "worst area 0.941082 0.343546 0.941550 0.959213 \n",
- "worst smoothness 0.119616 0.077503 0.150549 0.123523 \n",
- "worst compactness 0.413463 0.277830 0.455774 0.390410 \n",
- "worst concavity 0.526911 0.301025 0.563879 0.512606 \n",
- "worst concave points 0.744214 0.295316 0.771241 0.722017 \n",
- "worst symmetry 0.163953 0.105008 0.189115 0.143570 \n",
- "worst fractal dimension 0.007066 0.119205 0.051019 0.003738 \n",
- "\n",
- " mean smoothness mean compactness mean concavity \\\n",
- "mean radius 0.170581 0.506124 0.676764 \n",
- "mean texture -0.023389 0.236702 0.302418 \n",
- "mean perimeter 0.207278 0.556936 0.716136 \n",
- "mean area 0.177028 0.498502 0.685983 \n",
- "mean smoothness 1.000000 0.659123 0.521984 \n",
- "mean compactness 0.659123 1.000000 0.883121 \n",
- "mean concavity 0.521984 0.883121 1.000000 \n",
- "mean concave points 0.553695 0.831135 0.921391 \n",
- "mean symmetry 0.557775 0.602641 0.500667 \n",
- "mean fractal dimension 0.584792 0.565369 0.336783 \n",
- "radius error 0.301467 0.497473 0.631925 \n",
- "texture error 0.068406 0.046205 0.076218 \n",
- "perimeter error 0.296092 0.548905 0.660391 \n",
- "area error 0.246552 0.455653 0.617427 \n",
- "smoothness error 0.332375 0.135299 0.098564 \n",
- "compactness error 0.318943 0.738722 0.670279 \n",
- "concavity error 0.248396 0.570517 0.691270 \n",
- "concave points error 0.380676 0.642262 0.683260 \n",
- "symmetry error 0.200774 0.229977 0.178009 \n",
- "fractal dimension error 0.283607 0.507318 0.449301 \n",
- "worst radius 0.213120 0.535315 0.688236 \n",
- "worst texture 0.036072 0.248133 0.299879 \n",
- "worst perimeter 0.238853 0.590210 0.729565 \n",
- "worst area 0.206718 0.509604 0.675987 \n",
- "worst smoothness 0.805324 0.565541 0.448822 \n",
- "worst compactness 0.472468 0.865809 0.754968 \n",
- "worst concavity 0.434926 0.816275 0.884103 \n",
- "worst concave points 0.503053 0.815573 0.861323 \n",
- "worst symmetry 0.394309 0.510223 0.409464 \n",
- "worst fractal dimension 0.499316 0.687382 0.514930 \n",
- "\n",
- " mean concave points mean symmetry \\\n",
- "mean radius 0.822529 0.147741 \n",
- "mean texture 0.293464 0.071401 \n",
- "mean perimeter 0.850977 0.183027 \n",
- "mean area 0.823269 0.151293 \n",
- "mean smoothness 0.553695 0.557775 \n",
- "mean compactness 0.831135 0.602641 \n",
- "mean concavity 0.921391 0.500667 \n",
- "mean concave points 1.000000 0.462497 \n",
- "mean symmetry 0.462497 1.000000 \n",
- "mean fractal dimension 0.166917 0.479921 \n",
- "radius error 0.698050 0.303379 \n",
- "texture error 0.021480 0.128053 \n",
- "perimeter error 0.710650 0.313893 \n",
- "area error 0.690299 0.223970 \n",
- "smoothness error 0.027653 0.187321 \n",
- "compactness error 0.490424 0.421659 \n",
- "concavity error 0.439167 0.342627 \n",
- "concave points error 0.615634 0.393298 \n",
- "symmetry error 0.095351 0.449137 \n",
- "fractal dimension error 0.257584 0.331786 \n",
- "worst radius 0.830318 0.185728 \n",
- "worst texture 0.292752 0.090651 \n",
- "worst perimeter 0.855923 0.219169 \n",
- "worst area 0.809630 0.177193 \n",
- "worst smoothness 0.452753 0.426675 \n",
- "worst compactness 0.667454 0.473200 \n",
- "worst concavity 0.752399 0.433721 \n",
- "worst concave points 0.910155 0.430297 \n",
- "worst symmetry 0.375744 0.699826 \n",
- "worst fractal dimension 0.368661 0.438413 \n",
- "\n",
- " mean fractal dimension ... \\\n",
- "mean radius -0.311631 ... \n",
- "mean texture -0.076437 ... \n",
- "mean perimeter -0.261477 ... \n",
- "mean area -0.283110 ... \n",
- "mean smoothness 0.584792 ... \n",
- "mean compactness 0.565369 ... \n",
- "mean concavity 0.336783 ... \n",
- "mean concave points 0.166917 ... \n",
- "mean symmetry 0.479921 ... \n",
- "mean fractal dimension 1.000000 ... \n",
- "radius error 0.000111 ... \n",
- "texture error 0.164174 ... \n",
- "perimeter error 0.039830 ... \n",
- "area error -0.090170 ... \n",
- "smoothness error 0.401964 ... \n",
- "compactness error 0.559837 ... \n",
- "concavity error 0.446630 ... \n",
- "concave points error 0.341198 ... \n",
- "symmetry error 0.345007 ... \n",
- "fractal dimension error 0.688132 ... \n",
- "worst radius -0.253691 ... \n",
- "worst texture -0.051269 ... \n",
- "worst perimeter -0.205151 ... \n",
- "worst area -0.231854 ... \n",
- "worst smoothness 0.504942 ... \n",
- "worst compactness 0.458798 ... \n",
- "worst concavity 0.346234 ... \n",
- "worst concave points 0.175325 ... \n",
- "worst symmetry 0.334019 ... \n",
- "worst fractal dimension 0.767297 ... \n",
- "\n",
- " worst radius worst texture worst perimeter \\\n",
- "mean radius 0.969539 0.297008 0.965137 \n",
- "mean texture 0.352573 0.912045 0.358040 \n",
- "mean perimeter 0.969476 0.303038 0.970387 \n",
- "mean area 0.962746 0.287489 0.959120 \n",
- "mean smoothness 0.213120 0.036072 0.238853 \n",
- "mean compactness 0.535315 0.248133 0.590210 \n",
- "mean concavity 0.688236 0.299879 0.729565 \n",
- "mean concave points 0.830318 0.292752 0.855923 \n",
- "mean symmetry 0.185728 0.090651 0.219169 \n",
- "mean fractal dimension -0.253691 -0.051269 -0.205151 \n",
- "radius error 0.715065 0.194799 0.719684 \n",
- "texture error -0.111690 0.409003 -0.102242 \n",
- "perimeter error 0.697201 0.200371 0.721031 \n",
- "area error 0.757373 0.196497 0.761213 \n",
- "smoothness error -0.230691 -0.074743 -0.217304 \n",
- "compactness error 0.204607 0.143003 0.260516 \n",
- "concavity error 0.186904 0.100241 0.226680 \n",
- "concave points error 0.358127 0.086741 0.394999 \n",
- "symmetry error -0.128121 -0.077473 -0.103753 \n",
- "fractal dimension error -0.037488 -0.003195 -0.001000 \n",
- "worst radius 1.000000 0.359921 0.993708 \n",
- "worst texture 0.359921 1.000000 0.365098 \n",
- "worst perimeter 0.993708 0.365098 1.000000 \n",
- "worst area 0.984015 0.345842 0.977578 \n",
- "worst smoothness 0.216574 0.225429 0.236775 \n",
- "worst compactness 0.475820 0.360832 0.529408 \n",
- "worst concavity 0.573975 0.368366 0.618344 \n",
- "worst concave points 0.787424 0.359755 0.816322 \n",
- "worst symmetry 0.243529 0.233027 0.269493 \n",
- "worst fractal dimension 0.093492 0.219122 0.138957 \n",
- "\n",
- " worst area worst smoothness worst compactness \\\n",
- "mean radius 0.941082 0.119616 0.413463 \n",
- "mean texture 0.343546 0.077503 0.277830 \n",
- "mean perimeter 0.941550 0.150549 0.455774 \n",
- "mean area 0.959213 0.123523 0.390410 \n",
- "mean smoothness 0.206718 0.805324 0.472468 \n",
- "mean compactness 0.509604 0.565541 0.865809 \n",
- "mean concavity 0.675987 0.448822 0.754968 \n",
- "mean concave points 0.809630 0.452753 0.667454 \n",
- "mean symmetry 0.177193 0.426675 0.473200 \n",
- "mean fractal dimension -0.231854 0.504942 0.458798 \n",
- "radius error 0.751548 0.141919 0.287103 \n",
- "texture error -0.083195 -0.073658 -0.092439 \n",
- "perimeter error 0.730713 0.130054 0.341919 \n",
- "area error 0.811408 0.125389 0.283257 \n",
- "smoothness error -0.182195 0.314457 -0.055558 \n",
- "compactness error 0.199371 0.227394 0.678780 \n",
- "concavity error 0.188353 0.168481 0.484858 \n",
- "concave points error 0.342271 0.215351 0.452888 \n",
- "symmetry error -0.110343 -0.012662 0.060255 \n",
- "fractal dimension error -0.022736 0.170568 0.390159 \n",
- "worst radius 0.984015 0.216574 0.475820 \n",
- "worst texture 0.345842 0.225429 0.360832 \n",
- "worst perimeter 0.977578 0.236775 0.529408 \n",
- "worst area 1.000000 0.209145 0.438296 \n",
- "worst smoothness 0.209145 1.000000 0.568187 \n",
- "worst compactness 0.438296 0.568187 1.000000 \n",
- "worst concavity 0.543331 0.518523 0.892261 \n",
- "worst concave points 0.747419 0.547691 0.801080 \n",
- "worst symmetry 0.209146 0.493838 0.614441 \n",
- "worst fractal dimension 0.079647 0.617624 0.810455 \n",
- "\n",
- " worst concavity worst concave points \\\n",
- "mean radius 0.526911 0.744214 \n",
- "mean texture 0.301025 0.295316 \n",
- "mean perimeter 0.563879 0.771241 \n",
- "mean area 0.512606 0.722017 \n",
- "mean smoothness 0.434926 0.503053 \n",
- "mean compactness 0.816275 0.815573 \n",
- "mean concavity 0.884103 0.861323 \n",
- "mean concave points 0.752399 0.910155 \n",
- "mean symmetry 0.433721 0.430297 \n",
- "mean fractal dimension 0.346234 0.175325 \n",
- "radius error 0.380585 0.531062 \n",
- "texture error -0.068956 -0.119638 \n",
- "perimeter error 0.418899 0.554897 \n",
- "area error 0.385100 0.538166 \n",
- "smoothness error -0.058298 -0.102007 \n",
- "compactness error 0.639147 0.483208 \n",
- "concavity error 0.662564 0.440472 \n",
- "concave points error 0.549592 0.602450 \n",
- "symmetry error 0.037119 -0.030413 \n",
- "fractal dimension error 0.379975 0.215204 \n",
- "worst radius 0.573975 0.787424 \n",
- "worst texture 0.368366 0.359755 \n",
- "worst perimeter 0.618344 0.816322 \n",
- "worst area 0.543331 0.747419 \n",
- "worst smoothness 0.518523 0.547691 \n",
- "worst compactness 0.892261 0.801080 \n",
- "worst concavity 1.000000 0.855434 \n",
- "worst concave points 0.855434 1.000000 \n",
- "worst symmetry 0.532520 0.502528 \n",
- "worst fractal dimension 0.686511 0.511114 \n",
- "\n",
- " worst symmetry worst fractal dimension \n",
- "mean radius 0.163953 0.007066 \n",
- "mean texture 0.105008 0.119205 \n",
- "mean perimeter 0.189115 0.051019 \n",
- "mean area 0.143570 0.003738 \n",
- "mean smoothness 0.394309 0.499316 \n",
- "mean compactness 0.510223 0.687382 \n",
- "mean concavity 0.409464 0.514930 \n",
- "mean concave points 0.375744 0.368661 \n",
- "mean symmetry 0.699826 0.438413 \n",
- "mean fractal dimension 0.334019 0.767297 \n",
- "radius error 0.094543 0.049559 \n",
- "texture error -0.128215 -0.045655 \n",
- "perimeter error 0.109930 0.085433 \n",
- "area error 0.074126 0.017539 \n",
- "smoothness error -0.107342 0.101480 \n",
- "compactness error 0.277878 0.590973 \n",
- "concavity error 0.197788 0.439329 \n",
- "concave points error 0.143116 0.310655 \n",
- "symmetry error 0.389402 0.078079 \n",
- "fractal dimension error 0.111094 0.591328 \n",
- "worst radius 0.243529 0.093492 \n",
- "worst texture 0.233027 0.219122 \n",
- "worst perimeter 0.269493 0.138957 \n",
- "worst area 0.209146 0.079647 \n",
- "worst smoothness 0.493838 0.617624 \n",
- "worst compactness 0.614441 0.810455 \n",
- "worst concavity 0.532520 0.686511 \n",
- "worst concave points 0.502528 0.511114 \n",
- "worst symmetry 1.000000 0.537848 \n",
- "worst fractal dimension 0.537848 1.000000 \n",
- "\n",
- "[30 rows x 30 columns]"
- ]
- },
- "execution_count": 22,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "df.corr()"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 25,
- "metadata": {},
- "outputs": [],
- "source": [
- "from sklearn.model_selection import train_test_split\n",
- "\n",
- "X = data.data\n",
- "y = data.target\n",
- "X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.3)"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 27,
- "metadata": {},
- "outputs": [],
- "source": [
- "from sklearn.preprocessing import StandardScaler\n",
- "\n",
- "sc = StandardScaler()\n",
- "sc.fit(X_train)\n",
- "\n",
- "X_train_std = sc.transform(X_train)\n",
- "X_test_std = sc.transform(X_test)"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 42,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "LogisticRegression(C=1000, class_weight=None, dual=False, fit_intercept=True,\n",
- " intercept_scaling=1, max_iter=100, multi_class='ovr', n_jobs=1,\n",
- " penalty='l2', random_state=None, solver='liblinear', tol=0.0001,\n",
- " verbose=0, warm_start=False)"
- ]
- },
- "execution_count": 42,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "from sklearn.linear_model import LogisticRegression\n",
- "\n",
- "lr = LogisticRegression(C=1000)\n",
- "lr.fit(X_train, y_train)"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 43,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "array([1, 1, 1, 1, 0, 0, 1, 1, 0, 0, 0, 0, 0, 1, 0, 1, 1, 0, 1, 1, 1, 1, 1,\n",
- " 1, 1, 1, 0, 0, 1, 0, 1, 1, 0, 0, 1, 1, 0, 1, 0, 0, 1, 0, 0, 0, 1, 1,\n",
- " 0, 1, 1, 1, 1, 0, 1, 0, 1, 1, 1, 0, 0, 1, 1, 0, 1, 1, 0, 0, 0, 0, 0,\n",
- " 0, 1, 0, 1, 1, 0, 1, 1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 0, 1, 0, 1, 0,\n",
- " 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 1, 0, 0, 0, 1, 1, 0, 1, 0, 1, 1, 1, 0,\n",
- " 0, 1, 0, 0, 1, 1, 0, 1, 1, 1, 1, 1, 0, 1, 1, 0, 1, 1, 0, 0, 1, 1, 0,\n",
- " 1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 1, 1,\n",
- " 1, 1, 0, 1, 1, 1, 1, 1, 1, 0])"
- ]
- },
- "execution_count": 43,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "lr.predict(X_test_std)"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 44,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "array([1, 0, 1, 1, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 1, 1, 1, 1, 0,\n",
- " 1, 1, 0, 0, 0, 1, 0, 1, 1, 1, 0, 1, 1, 0, 1, 0, 1, 1, 1, 0, 0, 1, 1,\n",
- " 0, 1, 1, 1, 0, 0, 0, 0, 1, 1, 1, 0, 0, 1, 1, 1, 1, 1, 1, 1, 0, 0, 0,\n",
- " 1, 1, 0, 1, 0, 0, 1, 1, 1, 1, 0, 1, 1, 1, 1, 0, 1, 0, 0, 1, 0, 1, 1,\n",
- " 1, 1, 0, 1, 0, 0, 1, 0, 1, 0, 1, 0, 0, 0, 1, 1, 0, 1, 0, 1, 1, 1, 1,\n",
- " 0, 1, 0, 0, 1, 0, 0, 1, 1, 1, 1, 0, 0, 1, 0, 1, 1, 1, 1, 0, 1, 1, 0,\n",
- " 1, 1, 1, 1, 1, 0, 1, 0, 1, 0, 1, 0, 1, 1, 1, 1, 0, 1, 1, 1, 0, 1, 1,\n",
- " 1, 1, 1, 1, 0, 1, 1, 1, 1, 0])"
- ]
- },
- "execution_count": 44,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "y_test"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 45,
- "metadata": {},
- "outputs": [
- {
- "data": {
- "text/plain": [
- "0.79532163742690054"
- ]
- },
- "execution_count": 45,
- "metadata": {},
- "output_type": "execute_result"
- }
- ],
- "source": [
- "from sklearn import metrics\n",
- "\n",
- "predicts = lr.predict(X_test_std)\n",
- "metrics.accuracy_score(y_test, predicts)"
- ]
- }
- ],
- "metadata": {
- "kernelspec": {
- "display_name": "Python 3",
- "language": "python",
- "name": "python3"
- },
- "language_info": {
- "codemirror_mode": {
- "name": "ipython",
- "version": 3
- },
- "file_extension": ".py",
- "mimetype": "text/x-python",
- "name": "python",
- "nbconvert_exporter": "python",
- "pygments_lexer": "ipython3",
- "version": "3.6.0"
- }
- },
- "nbformat": 4,
- "nbformat_minor": 2
- }
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