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- sessionInfo() R version 3.5.1 (2018-07-02)
- Platform: x86_64-pc-linux-gnu (64-bit)
- Running under: Debian GNU/Linux 9 (stretch)
- Matrix products: default
- BLAS: /fsimb/common/tools/R/3.5.1/lib/R/lib/libRblas.so
- LAPACK: /fsimb/common/tools/R/3.5.1/lib/R/lib/libRlapack.so
- locale:
- [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
- [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
- [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
- [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
- [9] LC_ADDRESS=C LC_TELEPHONE=C
- [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
- attached base packages:
- [1] grid stats4 parallel stats graphics grDevices utils
- [8] datasets methods base
- other attached packages:
- [1] makeitprettier_0.1 ggthemes_4.2.0 scales_1.0.0
- [4] ggplot2_3.2.1 ChIPseeker_1.18.0 rtracklayer_1.42.2
- [7] GenomicFeatures_1.34.8 AnnotationDbi_1.44.0 Biobase_2.42.0
- [10] GenomicRanges_1.34.0 GenomeInfoDb_1.18.2 IRanges_2.16.0
- [13] S4Vectors_0.20.1 BiocGenerics_0.28.0 data.table_1.12.2
- [16] magrittr_1.5
- loaded via a namespace (and not attached):
- [1] bitops_1.0-6
- [2] matrixStats_0.54.0
- [3] enrichplot_1.2.0
- [4] bit64_0.9-7
- [5] RColorBrewer_1.1-2
- [6] progress_1.2.0
- [7] httr_1.4.1
- [8] UpSetR_1.3.3
- [9] tools_3.5.1
- [10] R6_2.4.0
- [11] KernSmooth_2.23-15
- [12] DBI_1.0.0
- [13] lazyeval_0.2.2
- [14] colorspace_1.4-1
- [15] withr_2.1.2
- [16] tidyselect_0.2.5
- [17] gridExtra_2.3
- [18] prettyunits_1.0.2
- [19] bit_1.1-14
- [20] compiler_3.5.1
- [21] xml2_1.2.0
- [22] DelayedArray_0.8.0
- [23] triebeard_0.3.0
- [24] caTools_1.17.1.2
- [25] ggridges_0.5.1
- [26] stringr_1.4.0
- [27] digest_0.6.20
- [28] Rsamtools_1.34.1
- [29] DOSE_3.8.2
- [30] XVector_0.22.0
- [31] pkgconfig_2.0.2
- [32] plotrix_3.7-6
- [33] rlang_0.4.0
- [34] RSQLite_2.1.1
- [35] gridGraphics_0.3-0
- [36] TxDb.Hsapiens.UCSC.hg19.knownGene_3.2.2
- [37] farver_1.1.0
- [38] jsonlite_1.6
- [39] gtools_3.8.1
- [40] BiocParallel_1.16.6
- [41] GOSemSim_2.8.0
- [42] dplyr_0.8.3
- [43] RCurl_1.95-4.12
- [44] ggplotify_0.0.4
- [45] GO.db_3.7.0
- [46] GenomeInfoDbData_1.2.0
- [47] Matrix_1.2-17
- [48] Rcpp_1.0.2
- [49] munsell_0.5.0
- [50] viridis_0.5.1
- [51] stringi_1.4.3
- [52] ggraph_1.0.2
- [53] MASS_7.3-51.3
- [54] SummarizedExperiment_1.12.0
- [55] zlibbioc_1.28.0
- [56] gplots_3.0.1.1
- [57] plyr_1.8.4
- [58] qvalue_2.14.1
- [59] blob_1.1.1
- [60] gdata_2.18.0
- [61] ggrepel_0.8.0
- [62] DO.db_2.9
- [63] crayon_1.3.4
- [64] fortunes_1.5-4
- [65] lattice_0.20-38
- [66] Biostrings_2.50.2
- [67] cowplot_0.9.4
- [68] splines_3.5.1
- [69] hms_0.4.2
- [70] pillar_1.4.2
- [71] fgsea_1.8.0
- [72] igraph_1.2.4
- [73] boot_1.3-20
- [74] reshape2_1.4.3
- [75] biomaRt_2.38.0
- [76] fastmatch_1.1-0
- [77] XML_3.98-1.20
- [78] glue_1.3.1
- [79] tweenr_1.0.1
- [80] urltools_1.7.3
- [81] gtable_0.3.0
- [82] purrr_0.3.2
- [83] polyclip_1.10-0
- [84] assertthat_0.2.1
- [85] gridBase_0.4-7
- [86] ggforce_0.2.1
- [87] europepmc_0.3
- [88] viridisLite_0.3.0
- [89] tibble_2.1.3
- [90] rvcheck_0.1.3
- [91] GenomicAlignments_1.18.1
- [92] memoise_1.1.0
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