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- $ nextflow run main.nf
- N E X T F L O W ~ version 0.27.6
- Launching `main.nf` [lonely_torvalds] - revision: e7234adafd
- [warm up] executor > local
- [f3/03efca] Submitted process > test (3)
- [ca/b06143] Submitted process > test (4)
- [04/d99e0c] Submitted process > test (2)
- [1d/3d3e95] Submitted process > test (1)
- [b5/50b6c5] Submitted process > test (5)
- ERROR ~ Error executing process > 'test (4)'
- Caused by:
- Process `test (4)` terminated with an error exit status (1)
- Command executed [/home/diogosilva/Diogo/Science/Tests/Nextflow/environment_issue/templates/test_script.py]:
- #!/usr/bin/env python3
- from utils.base import var
- print(var)
- Command exit status:
- 1
- Command output:
- (empty)
- Command error:
- Traceback (most recent call last):
- File ".command.sh", line 4, in <module>
- from utils.base import var
- ImportError: No module named 'utils'
- Work dir:
- /home/diogosilva/Diogo/Science/Tests/Nextflow/environment_issue/work/ca/b06143a3ffa473fc971c382f398485
- Tip: you can try to figure out what's wrong by changing to the process work dir and showing the script file named `.command.sh`
- -- Check '.nextflow.log' file for details
- WARN: Killing pending tasks (4)
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