{
 "cells": [
  {
   "metadata": {
    "trusted": true
   },
   "cell_type": "code",
   "source": "from scipy.cluster.hierarchy import linkage\n# Build the hierarchical cluster\nZ = linkage(upper_M, method = 'average', metric = 'euclidean')\nZ[:5]",
   "execution_count": 41,
   "outputs": [
    {
     "data": {
      "text/plain": "array([[37.        , 86.        ,  0.00273896,  2.        ],\n       [ 0.        , 10.        ,  0.00306359,  2.        ],\n       [40.        , 64.        ,  0.00358977,  2.        ],\n       [18.        , 66.        ,  0.00454632,  2.        ],\n       [13.        , 50.        ,  0.00481852,  2.        ]])"
     },
     "execution_count": 41,
     "metadata": {},
     "output_type": "execute_result"
    }
   ]
  },
  {
   "metadata": {
    "trusted": true
   },
   "cell_type": "code",
   "source": "# Set the figure size and some labels\nfig, ax = plt.subplots(figsize=(25, 10))\nax.set_title('Hierarchical Clustering Dendrogram')\nax.set_xlabel('Player index')\nax.set_ylabel('Distance')\n# Plot the dendogram\n_ = sci.cluster.hierarchy.dendrogram(\n    Z,\n    leaf_rotation = 90.,\n    leaf_font_size = 8.,\n    ax = ax\n)",
   "execution_count": null,
   "outputs": []
  }
 ],
 "metadata": {
  "gist_id": "db542fba0867273b743e507a30e79e8e",
  "kernelspec": {
   "name": "python3",
   "display_name": "Python 3",
   "language": "python"
  },
  "language_info": {
   "name": "python",
   "version": "3.6.3",
   "mimetype": "text/x-python",
   "codemirror_mode": {
    "name": "ipython",
    "version": 3
   },
   "pygments_lexer": "ipython3",
   "nbconvert_exporter": "python",
   "file_extension": ".py"
  },
  "toc": {
   "nav_menu": {},
   "number_sections": true,
   "sideBar": true,
   "skip_h1_title": false,
   "toc_cell": false,
   "toc_position": {
    "height": "483.41033935546875px",
    "left": "0px",
    "right": "1362px",
    "top": "109.57880401611328px",
    "width": "119.0081558227539px"
   },
   "toc_section_display": "block",
   "toc_window_display": true
  },
  "varInspector": {
   "cols": {
    "lenName": 16,
    "lenType": 16,
    "lenVar": 40
   },
   "kernels_config": {
    "python": {
     "delete_cmd_postfix": "",
     "delete_cmd_prefix": "del ",
     "library": "var_list.py",
     "varRefreshCmd": "print(var_dic_list())"
    },
    "r": {
     "delete_cmd_postfix": ") ",
     "delete_cmd_prefix": "rm(",
     "library": "var_list.r",
     "varRefreshCmd": "cat(var_dic_list()) "
    }
   },
   "types_to_exclude": [
    "module",
    "function",
    "builtin_function_or_method",
    "instance",
    "_Feature"
   ],
   "window_display": false
  }
 },
 "nbformat": 4,
 "nbformat_minor": 4
}