C1/7792: (nonmovable)
EA EA EA

C1/7D25: (nonmovable)
EA EA EA

C1/953B:
22 95 3B C3 JSL $C33B95 - can jump anywhere there's free space, but this overwrites the Active/Wait toggle, which needed to be disabled anyways

C1/9544:
22 9F 3B C3 JSL $C33B9F - can jump anywhere there's free space, but this overwrites the Active/Wait toggle, which needed to be disabled anyways

C2/067B:
A whole bunch of changes to the data for command timers. The full new table is:
10 10 20 40 10 00 00 20 10 20 20 00 20 10 20 10 10 00 00 00 00 00 70 20 10 40 10 10 00 00 00 00

C2/09BB:
EA EA EA (modifies condemmed calculation)
C2/09C2:
A9 1E LDA #$1E (modifies condemned calculation)
C2/09C9:
69 0A ADC #$0A (modifies condemned calcluation)

C2/09DD:
4B (normal ATB multiplier)

C2/09E3:
5A (hasted ATB multiplier)

C2/09F3:
69 14 ADC #$14 add the constant speed bonus back in
EB XBA
80 08 BRA #$08 skip ahead a bit to skip unusued code, much like you did

C2/1124:
0D 8F 3A ORA $3A8F The key to the whole hack! We check if we are in a menu OR an animation has started! (The variable is repurposed from Wait/Active)

C2/15D1:
EA EA Enabling desperation attacks at any time

C2/247A:
9C 8F 3A STZ $3A8F Initialize battle, skip active/wait set
EA EA EA EA NOPs

C2/4638
09 shorter time

C2/4681
09 shorter time

C2/468B
0D shorter time

C2/4695
11 shorter time

C2/5AEA: Regen/Seizure/Poison table
45 5B Regen
3B 5B Poison
45 5B Regen
E8 5A RTS
45 5B Regen
3B 5B Poison
45 5B Regen
E8 5A RTS

C2/5AF3:
FC 5B
FC 5B increment battle timers 2 more times per tick

C2/5BDF:
30 increased chances of running

C3/3B8C
A9 28
20 A5 3B make it always display Active
A9 20
80 19 skip ahead past our magic code

C3/3B95: the magic function 1
B2 76 C9 FF F0 03 EE 8F 3A 6B

C3/3B9F: the magic function 2
Ce 8F 3A C2 20 A5 76 6B