sudo R CMD INSTALL OpenMx.tar.gz -l /home/martin/.rkward/library/ [sudo] password for martin: * installing *source* package ‘OpenMx’ ... checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for gcc option to support OpenMP... -fopenmp checking whether gcc is installed... yes checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking if gcc accepts -dumpversion option... yes checking gcc version... 4.7.2 checking for gawk... gawk checking for inst/npsol/linux/x86_64/gcc4.7/libnpsol.a... yes configure: creating ./config.status config.status: creating src/Makevars config.status: executing src/omxSymbolTable.h commands config.status: executing src/omxSymbolTable.c commands ** libs gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c merge.c -o merge.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c npsolWrap.c -o npsolWrap.o npsolWrap.c: In Funktion »constraintFunction_«: npsolWrap.c:810:19: Warnung: Variable »size« gesetzt, aber nicht verwendet [-Wunused-but-set-variable] gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxAlgebra.c -o omxAlgebra.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxAlgebraFunctions.c -o omxAlgebraFunctions.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxAlgebraObjective.c -o omxAlgebraObjective.o gfortran -fpic -g -O2 -c omxBLAS.f -o omxBLAS.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxData.c -o omxData.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxExponential.c -o omxExponential.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxExportBackendState.c -o omxExportBackendState.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxFIMLObjective.c -o omxFIMLObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxFIMLSingleIteration.c -o omxFIMLSingleIteration.o omxFIMLSingleIteration.c: In Funktion »omxFIMLSingleIterationJoint«: omxFIMLSingleIteration.c:573:71: Warnung: »determinant« könnte in dieser Funktion uninitialisiert verwendet werden [-Wmaybe-uninitialized] gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxHessianCalculation.c -o omxHessianCalculation.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxImportFrontendState.c -o omxImportFrontendState.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxLISRELObjective.c -o omxLISRELObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxMLObjective.c -o omxMLObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxMatrix.c -o omxMatrix.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxNPSOLSpecific.c -o omxNPSOLSpecific.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxObjective.c -o omxObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxObjectiveTable.c -o omxObjectiveTable.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxOptimizer.c -o omxOptimizer.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxRAMObjective.c -o omxRAMObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxRObjective.c -o omxRObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxRowObjective.c -o omxRowObjective.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxSadmvnWrapper.c -o omxSadmvnWrapper.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxState.c -o omxState.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxSymbolTable.c -o omxSymbolTable.o gcc -std=gnu99 -I/usr/local/lib/R/include -DNDEBUG -I/usr/local/include -Wall -fopenmp -fpic -g -O2 -c omxWLSObjective.c -o omxWLSObjective.o gfortran -fpic -g -O2 -c sadmvn.f -o sadmvn.o gcc -std=gnu99 -shared -L/usr/local/lib -o OpenMx.so merge.o npsolWrap.o omxAlgebra.o omxAlgebraFunctions.o omxAlgebraObjective.o omxBLAS.o omxData.o omxExponential.o omxExportBackendState.o omxFIMLObjective.o omxFIMLSingleIteration.o omxHessianCalculation.o omxImportFrontendState.o omxLISRELObjective.o omxMLObjective.o omxMatrix.o omxNPSOLSpecific.o omxObjective.o omxObjectiveTable.o omxOptimizer.o omxRAMObjective.o omxRObjective.o omxRowObjective.o omxSadmvnWrapper.o omxState.o omxSymbolTable.o omxWLSObjective.o sadmvn.o -lgfortran -lm -lquadmath -L/usr/local/lib/R/lib -lRblas -L/usr/local/lib/R/lib -lRlapack -fopenmp -lnpsol -L../inst/npsol/linux/x86_64/gcc4.7 -lgfortran -lm -lquadmath installing to /home/martin/.rkward/library/OpenMx/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** preparing package for lazy loading Creating a generic function for ‘print’ from package ‘base’ in package ‘OpenMx’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘OpenMx’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘OpenMx’ Creating a generic function for ‘summary’ from package ‘base’ in package ‘OpenMx’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (OpenMx) [martin@archstation R]$