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  1. == 2016-02-06 16:07:35,291 runpy.CMakeMake INFO This is EasyBuild 2.7.0.dev0 (framework: 2.7.0.dev0, easyblocks: 2.7.0.dev0) on host node2016.delcatty.os.
  2. == 2016-02-06 16:07:35,291 runpy.CMakeMake INFO This is easyblock CMakeMake from module easybuild.easyblocks.generic.cmakemake (/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/easybuild-easyblocks/easybuild/easyblocks/generic/cmakemake.py)
  3. == 2016-02-06 16:07:35,292 runpy.CMakeMake INFO Build dir set to /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a
  4. == 2016-02-06 16:07:35,292 runpy.CMakeMake INFO Software install dir set to /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/software/CheMPS2/1.6-intel-2016a
  5. == 2016-02-06 16:07:35,292 runpy.CMakeMake INFO Module install dir set to /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all
  6. == 2016-02-06 16:07:35,293 runpy.CMakeMake INFO Init completed for application name CheMPS2 version 1.6
  7. == 2016-02-06 16:07:35,293 runpy.easyblock INFO Obtained application instance of for CheMPS2 (easyblock: CMakeMake)
  8. == 2016-02-06 16:07:35,293 runpy.CMakeMake INFO building and installing CheMPS2/1.6-intel-2016a...
  9. == 2016-02-06 16:07:35,293 runpy.CMakeMake INFO fetching files...
  10. == 2016-02-06 16:07:35,293 runpy.CMakeMake INFO Starting fetch step
  11. == 2016-02-06 16:07:35,295 runpy.CMakeMake INFO Running method fetch_step part of step fetch
  12. == 2016-02-06 16:07:35,296 runpy.CMakeMake WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
  13. == 2016-02-06 16:07:35,296 runpy.filetools INFO Command eb found at /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/easybuild-framework/eb
  14. == 2016-02-06 16:07:35,310 runpy.CMakeMake INFO Found file v1.6.tar.gz at /user/scratch/gent/vsc403/vsc40307/EB/sources/c/CheMPS2/v1.6.tar.gz
  15. == 2016-02-06 16:07:35,311 runpy.CMakeMake INFO Added sources: [{'path': '/user/scratch/gent/vsc403/vsc40307/EB/sources/c/CheMPS2/v1.6.tar.gz', 'cmd': None, 'finalpath': '/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a', 'name': 'v1.6.tar.gz', 'checksum': None}]
  16. == 2016-02-06 16:07:35,311 runpy.CMakeMake INFO no patches provided
  17. == 2016-02-06 16:07:35,334 runpy.CMakeMake INFO md5 checksum for /user/scratch/gent/vsc403/vsc40307/EB/sources/c/CheMPS2/v1.6.tar.gz: e4e93dd7fcd7f29d0e24441762e31917
  18. == 2016-02-06 16:07:35,335 runpy.CMakeMake INFO Checking dirs that need to be created: ['/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/software/CheMPS2/1.6-intel-2016a', '/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all/CheMPS2', '/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/chem/CheMPS2']
  19. == 2016-02-06 16:07:35,335 runpy.filetools INFO Creating directory /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/software/CheMPS2/1.6-intel-2016a (parents: True, set_gid: False, sticky: False)
  20. == 2016-02-06 16:07:35,335 runpy.filetools INFO Creating directory /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all/CheMPS2 (parents: True, set_gid: False, sticky: False)
  21. == 2016-02-06 16:07:35,336 runpy.filetools INFO Creating directory /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/chem/CheMPS2 (parents: True, set_gid: False, sticky: False)
  22. == 2016-02-06 16:07:35,336 runpy.CMakeMake INFO creating build dir, resetting environment...
  23. == 2016-02-06 16:07:35,336 runpy.CMakeMake INFO Starting ready step
  24. == 2016-02-06 16:07:35,338 runpy.CMakeMake INFO Running method check_readiness_step part of step ready
  25. == 2016-02-06 16:07:35,344 runpy.CMakeMake INFO Setting parallelism: 8
  26. == 2016-02-06 16:07:35,487 runpy.CMakeMake WARNING Loaded modules detected: ['cluster/delcatty']
  27. == 2016-02-06 16:07:36,807 runpy.CMakeMake INFO Running method make_builddir part of step ready
  28. == 2016-02-06 16:07:36,807 runpy.filetools INFO Creating directory /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a (parents: True, set_gid: False, sticky: False)
  29. == 2016-02-06 16:07:36,808 runpy.CMakeMake INFO Running method env_reset_changes part of step ready
  30. == 2016-02-06 16:07:36,808 runpy.CMakeMake INFO Running method handle_iterate_opts part of step ready
  31. == 2016-02-06 16:07:36,808 runpy.CMakeMake INFO unpacking...
  32. == 2016-02-06 16:07:36,808 runpy.CMakeMake INFO Starting source step
  33. == 2016-02-06 16:07:36,810 runpy.CMakeMake INFO Running method checksum_step part of step source
  34. == 2016-02-06 16:07:36,810 runpy.CMakeMake INFO Checksum verification for /user/scratch/gent/vsc403/vsc40307/EB/sources/c/CheMPS2/v1.6.tar.gz using None passed.
  35. == 2016-02-06 16:07:36,811 runpy.CMakeMake INFO Running method extract_step part of step source
  36. == 2016-02-06 16:07:36,811 runpy.CMakeMake INFO Unpacking source v1.6.tar.gz
  37. == 2016-02-06 16:07:36,842 runpy.CMakeMake INFO patching...
  38. == 2016-02-06 16:07:36,842 runpy.CMakeMake INFO Starting patch step
  39. == 2016-02-06 16:07:36,845 runpy.CMakeMake INFO Running method patch_step part of step patch
  40. == 2016-02-06 16:07:36,845 runpy.CMakeMake INFO preparing...
  41. == 2016-02-06 16:07:36,845 runpy.CMakeMake INFO Starting prepare step
  42. == 2016-02-06 16:07:36,847 runpy.CMakeMake INFO Running method prepare_step part of step prepare
  43. == 2016-02-06 16:07:44,821 runpy.Lmod INFO $MODULEPATH set based on list of module paths (via 'module use'): /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/user/scratchdelcatty/gent/vsc403/vsc40307/EB/delcatty/modules/all:/vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/modules/all:/etc/modulefiles/vsc:/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/apps/gent/SL6/sandybridge/modules/all
  44. == 2016-02-06 16:07:53,498 runpy.Lmod INFO $MODULEPATH set based on list of module paths (via 'module use'): /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/user/scratchdelcatty/gent/vsc403/vsc40307/EB/delcatty/modules/all:/vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/modules/all:/etc/modulefiles/vsc:/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/apps/gent/SL6/sandybridge/modules/all
  45. == 2016-02-06 16:07:58,369 runpy.filetools INFO Command lmod found at /apps/gent/SL6/sandybridge/software/Lmod/6.0.29-14595a5-hpc-ugent/lmod/6.0.29/libexec/lmod
  46. == 2016-02-06 16:07:58,370 runpy.filetools INFO Command lmod found at /apps/gent/SL6/sandybridge/software/Lmod/6.0.29-14595a5-hpc-ugent/lmod/6.0.29/libexec/lmod
  47. == 2016-02-06 16:07:58,370 runpy.filetools INFO Command lmod found at /apps/gent/SL6/sandybridge/software/Lmod/6.0.29-14595a5-hpc-ugent/lmod/6.0.29/libexec/lmod
  48. == 2016-02-06 16:07:58,370 runpy.Lmod INFO Full path for module command is /apps/gent/SL6/sandybridge/software/Lmod/6.0.29-14595a5-hpc-ugent/lmod/6.0.29/libexec/lmod, so using it
  49. == 2016-02-06 16:07:59,632 runpy.Lmod INFO Prepended list of module paths with path used by EasyBuild: /local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all
  50. == 2016-02-06 16:08:07,021 runpy.Lmod INFO $MODULEPATH set based on list of module paths (via 'module use'): /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/user/scratchdelcatty/gent/vsc403/vsc40307/EB/delcatty/modules/all:/vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/modules/all:/etc/modulefiles/vsc:/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/modules/all:/apps/gent/SL6/sandybridge/modules/all
  51. == 2016-02-06 16:08:07,174 runpy.Lmod INFO Found version 6.0.29
  52. == 2016-02-06 16:08:07,174 runpy.Lmod INFO Converted actual version to '6.0.29'
  53. == 2016-02-06 16:08:09,838 runpy.Intel INFO List of toolchain dependency modules and toolchain definition match!
  54. == 2016-02-06 16:08:09,849 runpy.ToolchainOptions WARNING option: option with name _opt_CC returns None
  55. == 2016-02-06 16:08:09,849 runpy.ToolchainOptions WARNING option: option with name _opt_CXX returns None
  56. == 2016-02-06 16:08:09,849 runpy.ToolchainOptions WARNING option: option with name _opt_F77 returns None
  57. == 2016-02-06 16:08:09,849 runpy.ToolchainOptions WARNING option: option with name _opt_F90 returns None
  58. == 2016-02-06 16:08:09,850 runpy.ToolchainOptions WARNING option: option with name _opt_FC returns None
  59. == 2016-02-06 16:08:09,979 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/include was not found
  60. == 2016-02-06 16:08:09,981 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib64 was not found
  61. == 2016-02-06 16:08:09,982 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/compiler/lib/intel64 was not found
  62. == 2016-02-06 16:08:10,037 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/include was not found
  63. == 2016-02-06 16:08:10,038 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib64 was not found
  64. == 2016-02-06 16:08:10,058 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/include was not found
  65. == 2016-02-06 16:08:10,059 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib64 was not found
  66. == 2016-02-06 16:08:10,059 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/compiler/lib/intel64 was not found
  67. == 2016-02-06 16:08:10,116 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/include was not found
  68. == 2016-02-06 16:08:10,117 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib64 was not found
  69. == 2016-02-06 16:08:10,117 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/compiler/lib/intel64 was not found
  70. == 2016-02-06 16:08:10,138 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/include was not found
  71. == 2016-02-06 16:08:10,140 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib64 was not found
  72. == 2016-02-06 16:08:10,153 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/lib64 was not found
  73. == 2016-02-06 16:08:10,163 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/lib64 was not found
  74. == 2016-02-06 16:08:10,164 runpy.IncludePaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/include was not found
  75. == 2016-02-06 16:08:10,166 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/lib64 was not found
  76. == 2016-02-06 16:08:10,167 runpy.LinkLibraryPaths WARNING flags_for_subdirs: directory /apps/gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/lib was not found
  77. == 2016-02-06 16:08:10,174 runpy.environment INFO Environment variable BLACS_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  78. == 2016-02-06 16:08:10,175 runpy.environment INFO Environment variable EBVARBLACS_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  79. == 2016-02-06 16:08:10,175 runpy.environment INFO Environment variable BLACS_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  80. == 2016-02-06 16:08:10,175 runpy.environment INFO Environment variable EBVARBLACS_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  81. == 2016-02-06 16:08:10,175 runpy.environment INFO Environment variable BLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
  82. == 2016-02-06 16:08:10,175 runpy.environment INFO Environment variable EBVARBLACS_MT_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
  83. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable BLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
  84. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable EBVARBLACS_STATIC_LIBS set to libmkl_blacs_intelmpi_lp64.a (previously undefined)
  85. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable BLAS_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  86. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable EBVARBLAS_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  87. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable BLAS_LAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  88. == 2016-02-06 16:08:10,176 runpy.environment INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  89. == 2016-02-06 16:08:10,177 runpy.environment INFO Environment variable BLAS_LAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  90. == 2016-02-06 16:08:10,177 runpy.environment INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  91. == 2016-02-06 16:08:10,177 runpy.environment INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  92. == 2016-02-06 16:08:10,177 runpy.environment INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  93. == 2016-02-06 16:08:10,177 runpy.environment INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  94. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  95. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable BLAS_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  96. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable EBVARBLAS_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  97. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable BLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  98. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  99. == 2016-02-06 16:08:10,178 runpy.environment INFO Environment variable BLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  100. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable EBVARBLAS_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  101. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable CC set to icc (previously undefined)
  102. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable EBVARCC set to icc (previously undefined)
  103. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable CFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  104. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable EBVARCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  105. == 2016-02-06 16:08:10,179 runpy.environment INFO Environment variable CPPFLAGS set to -I/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include -I/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/include -I/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/include (previously undefined)
  106. == 2016-02-06 16:08:10,180 runpy.environment INFO Environment variable EBVARCPPFLAGS set to -I/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include -I/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/include -I/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/include (previously undefined)
  107. == 2016-02-06 16:08:10,180 runpy.environment INFO Environment variable CXX set to icpc (previously undefined)
  108. == 2016-02-06 16:08:10,180 runpy.environment INFO Environment variable EBVARCXX set to icpc (previously undefined)
  109. == 2016-02-06 16:08:10,180 runpy.environment INFO Environment variable CXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  110. == 2016-02-06 16:08:10,180 runpy.environment INFO Environment variable EBVARCXXFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  111. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable F77 set to ifort (previously undefined)
  112. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable EBVARF77 set to ifort (previously undefined)
  113. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable F90 set to ifort (previously undefined)
  114. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable EBVARF90 set to ifort (previously undefined)
  115. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable F90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  116. == 2016-02-06 16:08:10,181 runpy.environment INFO Environment variable EBVARF90FLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  117. == 2016-02-06 16:08:10,182 runpy.environment INFO Environment variable FC set to ifort (previously undefined)
  118. == 2016-02-06 16:08:10,182 runpy.environment INFO Environment variable EBVARFC set to ifort (previously undefined)
  119. == 2016-02-06 16:08:10,182 runpy.environment INFO Environment variable FCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  120. == 2016-02-06 16:08:10,182 runpy.environment INFO Environment variable EBVARFCFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  121. == 2016-02-06 16:08:10,182 runpy.environment INFO Environment variable FFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  122. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable EBVARFFLAGS set to -O2 -xHost -ftz -fp-speculation=safe -fp-model source (previously undefined)
  123. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable FFTW_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  124. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable EBVARFFTW_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  125. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable FFTW_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  126. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable EBVARFFTW_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  127. == 2016-02-06 16:08:10,183 runpy.environment INFO Environment variable FFTW_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  128. == 2016-02-06 16:08:10,184 runpy.environment INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  129. == 2016-02-06 16:08:10,184 runpy.environment INFO Environment variable FFT_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  130. == 2016-02-06 16:08:10,184 runpy.environment INFO Environment variable EBVARFFT_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  131. == 2016-02-06 16:08:10,184 runpy.environment INFO Environment variable FFT_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  132. == 2016-02-06 16:08:10,184 runpy.environment INFO Environment variable EBVARFFT_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  133. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable FFT_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  134. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3xc_intel.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  135. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable I_MPI_CC set to icc (previously undefined)
  136. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable EBVARI_MPI_CC set to icc (previously undefined)
  137. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable I_MPI_CXX set to icpc (previously undefined)
  138. == 2016-02-06 16:08:10,185 runpy.environment INFO Environment variable EBVARI_MPI_CXX set to icpc (previously undefined)
  139. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable I_MPI_F77 set to ifort (previously undefined)
  140. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable EBVARI_MPI_F77 set to ifort (previously undefined)
  141. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable I_MPI_F90 set to ifort (previously undefined)
  142. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable EBVARI_MPI_F90 set to ifort (previously undefined)
  143. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable I_MPI_FC set to ifort (previously undefined)
  144. == 2016-02-06 16:08:10,186 runpy.environment INFO Environment variable EBVARI_MPI_FC set to ifort (previously undefined)
  145. == 2016-02-06 16:08:10,187 runpy.environment INFO Environment variable LAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  146. == 2016-02-06 16:08:10,187 runpy.environment INFO Environment variable EBVARLAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  147. == 2016-02-06 16:08:10,187 runpy.environment INFO Environment variable LAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  148. == 2016-02-06 16:08:10,187 runpy.environment INFO Environment variable EBVARLAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  149. == 2016-02-06 16:08:10,187 runpy.environment INFO Environment variable LAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  150. == 2016-02-06 16:08:10,188 runpy.environment INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  151. == 2016-02-06 16:08:10,188 runpy.environment INFO Environment variable LAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  152. == 2016-02-06 16:08:10,188 runpy.environment INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  153. == 2016-02-06 16:08:10,188 runpy.environment INFO Environment variable LDFLAGS set to -L/apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/lib/intel64 -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib -L/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/lib -L/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/lib (previously undefined)
  154. == 2016-02-06 16:08:10,188 runpy.environment INFO Environment variable EBVARLDFLAGS set to -L/apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/lib/intel64 -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 -L/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib -L/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/lib -L/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/lib (previously undefined)
  155. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable LIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  156. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable EBVARLIBBLACS set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  157. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable LIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  158. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable EBVARLIBBLACS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_blacs_intelmpi_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  159. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable LIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  160. == 2016-02-06 16:08:10,189 runpy.environment INFO Environment variable EBVARLIBBLAS set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  161. == 2016-02-06 16:08:10,190 runpy.environment INFO Environment variable LIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  162. == 2016-02-06 16:08:10,190 runpy.environment INFO Environment variable EBVARLIBBLAS_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  163. == 2016-02-06 16:08:10,190 runpy.environment INFO Environment variable LIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  164. == 2016-02-06 16:08:10,190 runpy.environment INFO Environment variable EBVARLIBFFT set to -Wl,-Bstatic -Wl,--start-group -lfftw3xc_intel -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  165. == 2016-02-06 16:08:10,190 runpy.environment INFO Environment variable LIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  166. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable EBVARLIBLAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  167. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable LIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  168. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable EBVARLIBLAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  169. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable LIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  170. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  171. == 2016-02-06 16:08:10,191 runpy.environment INFO Environment variable LIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  172. == 2016-02-06 16:08:10,192 runpy.environment INFO Environment variable EBVARLIBLAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  173. == 2016-02-06 16:08:10,192 runpy.environment INFO Environment variable LIBS set to -liomp5 -lpthread (previously undefined)
  174. == 2016-02-06 16:08:10,192 runpy.environment INFO Environment variable EBVARLIBS set to -liomp5 -lpthread (previously undefined)
  175. == 2016-02-06 16:08:10,192 runpy.environment INFO Environment variable LIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  176. == 2016-02-06 16:08:10,192 runpy.environment INFO Environment variable EBVARLIBSCALAPACK set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  177. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable LIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  178. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable EBVARLIBSCALAPACK_MT set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -lmkl_intel_lp64 -lmkl_intel_thread -lmkl_core -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  179. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable LIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  180. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic -liomp5 -lpthread (previously undefined)
  181. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable LIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  182. == 2016-02-06 16:08:10,193 runpy.environment INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -Wl,-Bstatic -Wl,--start-group -lmkl_scalapack_lp64 -Wl,--end-group -Wl,-Bdynamic (previously undefined)
  183. == 2016-02-06 16:08:10,194 runpy.environment INFO Environment variable MPICC set to mpicc (previously undefined)
  184. == 2016-02-06 16:08:10,194 runpy.environment INFO Environment variable EBVARMPICC set to mpicc (previously undefined)
  185. == 2016-02-06 16:08:10,194 runpy.environment INFO Environment variable MPICH_CC set to icc (previously undefined)
  186. == 2016-02-06 16:08:10,194 runpy.environment INFO Environment variable EBVARMPICH_CC set to icc (previously undefined)
  187. == 2016-02-06 16:08:10,194 runpy.environment INFO Environment variable MPICH_CXX set to icpc (previously undefined)
  188. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable EBVARMPICH_CXX set to icpc (previously undefined)
  189. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable MPICH_F77 set to ifort (previously undefined)
  190. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable EBVARMPICH_F77 set to ifort (previously undefined)
  191. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable MPICH_F90 set to ifort (previously undefined)
  192. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable EBVARMPICH_F90 set to ifort (previously undefined)
  193. == 2016-02-06 16:08:10,195 runpy.environment INFO Environment variable MPICH_FC set to ifort (previously undefined)
  194. == 2016-02-06 16:08:10,196 runpy.environment INFO Environment variable EBVARMPICH_FC set to ifort (previously undefined)
  195. == 2016-02-06 16:08:10,196 runpy.environment INFO Environment variable MPICXX set to mpicxx (previously undefined)
  196. == 2016-02-06 16:08:10,196 runpy.environment INFO Environment variable EBVARMPICXX set to mpicxx (previously undefined)
  197. == 2016-02-06 16:08:10,196 runpy.environment INFO Environment variable MPIF77 set to mpif77 (previously undefined)
  198. == 2016-02-06 16:08:10,196 runpy.environment INFO Environment variable EBVARMPIF77 set to mpif77 (previously undefined)
  199. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable MPIF90 set to mpif90 (previously undefined)
  200. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable EBVARMPIF90 set to mpif90 (previously undefined)
  201. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable MPIFC set to mpif90 (previously undefined)
  202. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable EBVARMPIFC set to mpif90 (previously undefined)
  203. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable MPI_INC_DIR set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/include64 (previously undefined)
  204. == 2016-02-06 16:08:10,197 runpy.environment INFO Environment variable EBVARMPI_INC_DIR set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/include64 (previously undefined)
  205. == 2016-02-06 16:08:10,198 runpy.environment INFO Environment variable MPI_LIB_DIR set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64 (previously undefined)
  206. == 2016-02-06 16:08:10,198 runpy.environment INFO Environment variable EBVARMPI_LIB_DIR set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64 (previously undefined)
  207. == 2016-02-06 16:08:10,198 runpy.environment INFO Environment variable MPI_LIB_SHARED set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64/libmpi.so (previously undefined)
  208. == 2016-02-06 16:08:10,198 runpy.environment INFO Environment variable EBVARMPI_LIB_SHARED set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64/libmpi.so (previously undefined)
  209. == 2016-02-06 16:08:10,198 runpy.environment INFO Environment variable MPI_LIB_STATIC set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64/libmpi.a (previously undefined)
  210. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable EBVARMPI_LIB_STATIC set to /apps/gent/SL6/sandybridge/software/impi/5.1.2.150-iccifort-2016.1.150-GCC-4.9.3-2.25/lib64/libmpi.a (previously undefined)
  211. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable OPTFLAGS set to -O2 -xHost (previously undefined)
  212. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable EBVAROPTFLAGS set to -O2 -xHost (previously undefined)
  213. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable PRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined)
  214. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable EBVARPRECFLAGS set to -ftz -fp-speculation=safe -fp-model source (previously undefined)
  215. == 2016-02-06 16:08:10,199 runpy.environment INFO Environment variable SCALAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  216. == 2016-02-06 16:08:10,200 runpy.environment INFO Environment variable EBVARSCALAPACK_INC_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include (previously undefined)
  217. == 2016-02-06 16:08:10,200 runpy.environment INFO Environment variable SCALAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  218. == 2016-02-06 16:08:10,200 runpy.environment INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64 (previously undefined)
  219. == 2016-02-06 16:08:10,200 runpy.environment INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  220. == 2016-02-06 16:08:10,200 runpy.environment INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_intel_thread.a,libmkl_core.a,libiomp5.a,libpthread.a (previously undefined)
  221. == 2016-02-06 16:08:10,201 runpy.environment INFO Environment variable SCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  222. == 2016-02-06 16:08:10,201 runpy.environment INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libmkl_scalapack_lp64.a,libmkl_blacs_intelmpi_lp64.a,libmkl_intel_lp64.a,libmkl_sequential.a,libmkl_core.a (previously undefined)
  223. == 2016-02-06 16:08:10,201 runpy.CMakeMake INFO Using /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a/CheMPS2-1.6/ as start dir
  224. == 2016-02-06 16:08:10,201 runpy.CMakeMake INFO configuring...
  225. == 2016-02-06 16:08:10,201 runpy.CMakeMake INFO Starting configure step
  226. == 2016-02-06 16:08:10,204 runpy.CMakeMake INFO Running method configure_step part of step configure
  227. == 2016-02-06 16:08:10,204 runpy.environment INFO Environment variable CMAKE_INCLUDE_PATH set to /apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/include:/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/include:/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/include (previously undefined)
  228. == 2016-02-06 16:08:10,204 runpy.environment INFO Environment variable CMAKE_LIBRARY_PATH set to /apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/lib/intel64:/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib:/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/mkl/lib/intel64:/apps/gent/SL6/sandybridge/software/imkl/11.3.1.150-iimpi-8.1.5-GCC-4.9.3-2.25/lib:/apps/gent/SL6/sandybridge/software/GSL/2.1-intel-2016a/lib:/user/scratch/gent/vsc403/vsc40307/EB/delcatty/software/HDF5/1.8.16-intel-2016a/lib (previously undefined)
  229. == 2016-02-06 16:08:42,143 runpy ERROR cmd " cmake /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a/CheMPS2-1.6/ -DCMAKE_INSTALL_PREFIX=/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/software/CheMPS2/1.6-intel-2016a -DCMAKE_C_COMPILER='icc' -DCMAKE_Fortran_FLAGS='-O2 -xHost -ftz -fp-speculation=safe -fp-model source' -DCMAKE_CXX_FLAGS='-O2 -xHost -ftz -fp-speculation=safe -fp-model source' -DCMAKE_CXX_COMPILER='icpc' -DCMAKE_Fortran_COMPILER='ifort' -DCMAKE_C_FLAGS='-O2 -xHost -ftz -fp-speculation=safe -fp-model source' -DCMAKE_VERBOSE_MAKEFILE=ON " exited with exitcode 1 and output:
  230. -- The C compiler identification is Intel 16.0.1.20151021
  231. -- The CXX compiler identification is Intel 16.0.1.20151021
  232. -- Check for working C compiler: /apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/compilers_and_libraries_2016.1.150/linux/bin/intel64/icc
  233. -- Check for working C compiler: /apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/compilers_and_libraries_2016.1.150/linux/bin/intel64/icc -- works
  234. -- Detecting C compiler ABI info
  235. -- Detecting C compiler ABI info - done
  236. -- Check for working CXX compiler: /apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/compilers_and_libraries_2016.1.150/linux/bin/intel64/icpc
  237. -- Check for working CXX compiler: /apps/gent/SL6/sandybridge/software/icc/2016.1.150-GCC-4.9.3-2.25/compilers_and_libraries_2016.1.150/linux/bin/intel64/icpc -- works
  238. -- Detecting CXX compiler ABI info
  239. -- Detecting CXX compiler ABI info - done
  240. -- Try OpenMP C flag = [-qopenmp]
  241. -- Performing Test OpenMP_FLAG_DETECTED
  242. -- Performing Test OpenMP_FLAG_DETECTED - Success
  243. -- Try OpenMP CXX flag = [-qopenmp]
  244. -- Performing Test OpenMP_FLAG_DETECTED
  245. -- Performing Test OpenMP_FLAG_DETECTED - Success
  246. -- Found OpenMP: -qopenmp
  247. -- Performing Test HAS_XHOST
  248. -- Performing Test HAS_XHOST - Success
  249. -- Performing Test HAS_MARCH_NATIVE
  250. -- Performing Test HAS_MARCH_NATIVE - Success
  251. -- Performing Test HAS_IPO
  252. -- Performing Test HAS_IPO - Success
  253. -- Performing Test HAS_FLTO
  254. -- Performing Test HAS_FLTO - Failed
  255. -- Looking for pthread.h
  256. -- Looking for pthread.h - found
  257. -- Looking for pthread_create
  258. -- Looking for pthread_create - found
  259. -- Found Threads: TRUE
  260. -- Looking for sgemm_
  261. -- Looking for sgemm_ - found
  262. -- A library with BLAS API found.
  263. -- Looking for cheev_
  264. -- Looking for cheev_ - found
  265. -- A library with LAPACK API found.
  266. CMake Error at /vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/share/cmake-3.4/Modules/FindPackageHandleStandardArgs.cmake:148 (message):
  267. Could NOT find HDF5 (missing: HDF5_LIBRARIES HDF5_INCLUDE_DIRS)
  268. Call Stack (most recent call first):
  269. /vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/share/cmake-3.4/Modules/FindPackageHandleStandardArgs.cmake:388 (_FPHSA_FAILURE_MESSAGE)
  270. /vscmnt/gent_vulpix_apps/_apps_gent/SL6/sandybridge/software/CMake/3.4.1-intel-2016a/share/cmake-3.4/Modules/FindHDF5.cmake:398 (find_package_handle_standard_args)
  271. CMakeLists.txt:82 (find_package)
  272.  
  273.  
  274. -- Configuring incomplete, errors occurred!
  275. See also "/tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a/easybuild_obj/CMakeFiles/CMakeOutput.log".
  276. See also "/tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a/easybuild_obj/CMakeFiles/CMakeError.log".
  277. (at easybuild/tools/run.py:397 in parse_cmd_output)
  278. == 2016-02-06 16:08:42,144 runpy.easyblock WARNING build failed (first 300 chars): cmd " cmake /tmp/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/CheMPS2/1.6/intel-2016a/CheMPS2-1.6/ -DCMAKE_INSTALL_PREFIX=/local/2136331.master15.delcatty.gent.vsc/tmp.MvPzDzQ733/tmp.KCLbefd2mB/eb_sandbox_20160206_16-05-56_A47MR/software/CheMPS2
  279. == 2016-02-06 16:08:42,144 runpy.CMakeMake INFO Closing log for application name CheMPS2 version 1.6
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