2014-11-27 22:07:40.4336|WARN|thread: 1|StandardUserErrors|Showing user error Failed to create a new commit.
LibGit2Sharp.UnmergedIndexEntriesException: Cannot create a tree from a not fully merged index.
   at LibGit2Sharp.Core.Ensure.HandleError(Int32 result)
   at LibGit2Sharp.Core.Proxy.git_tree_create_fromindex(Index index)
   at LibGit2Sharp.Repository.Commit(String message, Signature author, Signature committer, CommitOptions options)
   at LibGit2Sharp.RepositoryExtensions.Commit(IRepository repository, String message, Signature author, CommitOptions options)
   at LibGit2Sharp.RepositoryExtensions.Commit(IRepository repository, String message, CommitOptions options)
   at GitHub.ExclusiveRepositoryConnection.<>c__DisplayClass1.<Commit>b__0()
   at System.Reactive.Linq.ObservableImpl.Defer`1.Eval()
   at System.Reactive.Linq.ObservableImpl.Defer`1._.Run()
--- End of stack trace from previous location where exception was thrown ---
   at System.Reactive.PlatformServices.ExceptionServicesImpl.Rethrow(Exception exception)
   at System.Reactive.ExceptionHelpers.ThrowIfNotNull(Exception exception)
   at System.Reactive.Subjects.AsyncSubject`1.GetResult()
   at GitHub.Helpers.GitClient.<>c__DisplayClass27.<<CreateCommit>b__1e>d__30.MoveNext()
2014-11-27 22:07:18.5193|INFO|thread: 1|CommandLineHandler|Parsing command line arguments:C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4\GitHub.exe
2014-11-27 22:07:18.5593|INFO|thread: 1|AppInstanceCommunicator|Starting up as master instance of GitHub for Windows
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| #########################################
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| GitHub for Windows started. VERSION: 2.6.4.1
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| Build version: 9f13322724ea5a881ab9ef4176b40e91c713d901
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***************************************
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***                                 ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***                                 ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***        Have a problem?          ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***    Email support@github.com     ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***      and include this file      ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***                                 ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***                                 ***
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| ***************************************
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| OS Version: Windows NT 6.3.9600.0 amd64
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| CLR Version: 4.0.30319.34014
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| Current culture: en-US
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| Terminal Services session: no
2014-11-27 22:07:18.5883|INFO|thread: 8|StartupLogging| Location: C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4\GitHub.exe
2014-11-27 22:07:18.6163|INFO|thread: 1|HardwareRenderingHelper|Your video card appears to support hardware rendering. If this isn't the case and you see glitches
2014-11-27 22:07:18.6163|INFO|thread: 1|HardwareRenderingHelper|set the GH_FORCE_SW_RENDERING environment variable to 1
2014-11-27 22:07:18.6163|INFO|thread: 8|StartupLogging| ActivationUri: https://github-windows.s3.amazonaws.com/GitHub.application
2014-11-27 22:07:18.7904|WARN|thread: 1|POCOObservableForProperty|ReactiveUI.ReactiveCommandSix`1[[System.Object, mscorlib, Version=4.0.0.0, Culture=neutral, PublicKeyToken=b77a5c561934e089]] is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:18.9385|INFO|thread: 8|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:18.9385|INFO|thread: 8|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\ProgramData\Oracle\Java\javapath;c:\Program Files (x86)\Intel\iCLS Client\;c:\Program Files\Intel\iCLS Client\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\Program Files\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Windows Live\Shared;C:\Program Files\TortoiseSVN\bin
2014-11-27 22:07:18.9385|INFO|thread: 8|StartupLogging| =====================================================
2014-11-27 22:07:18.9385|INFO|thread: 8|StartupLogging|  DIAGNOSTICS                                        |
2014-11-27 22:07:18.9385|INFO|thread: 8|StartupLogging| =====================================================
2014-11-27 22:07:18.9465|INFO|thread: 8|StartupLogging| Git Extracted: 'True:
2014-11-27 22:07:18.9465|INFO|thread: 8|StartupLogging| PortableGit Dir Exists: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2'
2014-11-27 22:07:18.9465|INFO|thread: 8|StartupLogging| Git Executable Exists: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\git.exe'
2014-11-27 22:07:18.9465|INFO|thread: 8|StartupLogging| ----------------------------------------------------
2014-11-27 22:07:18.9465|INFO|thread: 8|StartupLogging| PATH: C:\ProgramData\Oracle\Java\javapath;c:\Program Files (x86)\Intel\iCLS Client\;c:\Program Files\Intel\iCLS Client\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\Program Files\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\IPT;C:\Program Files (x86)\Windows Live\Shared;C:\Program Files\TortoiseSVN\bin
2014-11-27 22:07:19.0186|INFO|thread: 1|App|Checking whether application is network deployed.
2014-11-27 22:07:19.0416|INFO|thread: 8|StartupLogger|Proxy information: (None)
2014-11-27 22:07:19.0416|INFO|thread: 8|StartupLogger|Couldn't fetch creds for proxy
2014-11-27 22:07:19.1557|INFO|thread: 1|ClickOnceAppIconHelper|Updating registry with our application icon 'C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4\Images\App.ico'
2014-11-27 22:07:19.7471|WARN|thread: 1|LogHost|SuppressChangeNotifications was called (perhaps via AddRange), yet you do not
2014-11-27 22:07:19.7471|WARN|thread: 1|LogHost|have a subscription to ShouldReset. This probably isn't what you want, as ItemsAdded
2014-11-27 22:07:19.7471|WARN|thread: 1|LogHost|and friends will appear to 'miss' items
2014-11-27 22:07:19.9792|INFO|thread: 8|PortablePackageManager|Already extracted PortableGit.7z, returning 100%
2014-11-27 22:07:21.5613|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.DropRepositoryView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:21.7784|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.DashboardView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:21.8765|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.RepositoryCloneProgress is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.0186|INFO|thread: 1|GitExtractionVisualHelper|Portable Git is already extracted
2014-11-27 22:07:22.0586|INFO|thread: 1|ReactiveScreen|Activating GitHub.ViewModels.ShellViewModel.
2014-11-27 22:07:22.0586|INFO|thread: 1|ReactiveScreen|Activating GitHub.ViewModels.DashboardViewModel.
2014-11-27 22:07:22.4178|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.SourceList is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.5249|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.SourceListRepositoryItem is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.5990|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.RepositoryNotFound is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.6340|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.PopupMenuView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.7601|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.AddOrCreatePopup is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.8521|INFO|thread: 1|PortablePackageManager|Already extracted gitignore.7z, returning 100%
2014-11-27 22:07:22.8521|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.CreateRepositoryTab is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.9572|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.BrowseRepositoriesTab is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:22.9982|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.BrowseRepositoriesList is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:23.1043|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.TwoFactorView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:23.1373|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.CertificateErrorView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:23.2084|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.UndoFlashView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:23.3725|WARN|thread: 1|LogHost|SuppressChangeNotifications was called (perhaps via AddRange), yet you do not
2014-11-27 22:07:23.3725|WARN|thread: 1|LogHost|have a subscription to ShouldReset. This probably isn't what you want, as ItemsAdded
2014-11-27 22:07:23.3725|WARN|thread: 1|LogHost|and friends will appear to 'miss' items
2014-11-27 22:07:23.5496|WARN|thread: 1|POCOObservableForProperty|GitHub.Validation.ReactivePropertyValidationResult is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:24.0309|WARN|thread: 1|POCOObservableForProperty|ReactiveUI.ReactiveCommandSix`1[[System.Reactive.Unit, System.Reactive.Core, Version=2.2.5.0, Culture=neutral, PublicKeyToken=31bf3856ad364e35]] is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:24.2541|WARN|thread: 1|LogHost|SuppressChangeNotifications was called (perhaps via AddRange), yet you do not
2014-11-27 22:07:24.2541|WARN|thread: 1|LogHost|have a subscription to ShouldReset. This probably isn't what you want, as ItemsAdded
2014-11-27 22:07:24.2541|WARN|thread: 1|LogHost|and friends will appear to 'miss' items
2014-11-27 22:07:24.6363|WARN|thread: 1|POCOObservableForProperty|ReactiveUI.ReactiveCommandSix`1[[GitHub.Models.ICommitModel, GitHub, Version=2.6.4.1, Culture=neutral, PublicKeyToken=null]] is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:24.8374|INFO|thread:13|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:25.2797|INFO|thread:13|RepositoryConnection|Loaded '5' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:26.0372|INFO|thread: 1|RepositoryHost|Log in from cache for login 'SubjectAlpha' to host 'https://api.github.com/' SUCCEEDED
2014-11-27 22:07:26.2064|INFO|thread:18|ApplicationShellInitializer|Running post login tasks. ~/.gitconfig is set up with user.name = 'SubjectAlpha' and user.email = 'vegihon@aol.com'
2014-11-27 22:07:26.3164|INFO|thread:18|SSHKeyHelper|ssh-agent already running
2014-11-27 22:07:26.3364|INFO|thread:18|PortablePackageManager|Already extracted git-media-amd64.7z, returning 100%
2014-11-27 22:07:26.3364|INFO|thread:18|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:26.3364|INFO|thread:18|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\WINDOWS\System32
2014-11-27 22:07:26.3875|INFO|thread:18|ProcessWrapper|Starting: Process - FileName: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\ssh-add.exe', Args: '"C:\Users\Jacob\.ssh\github_rsa"', Working Directory: C:\Users\Jacob\AppData\Local\Temp\
2014-11-27 22:07:26.4795|INFO|thread: 1|RepositoryViewModel|Refreshing all information for repo
2014-11-27 22:07:26.6176|WARN|thread: 1|LogHost|SuppressChangeNotifications was called (perhaps via AddRange), yet you do not
2014-11-27 22:07:26.6176|WARN|thread: 1|LogHost|have a subscription to ShouldReset. This probably isn't what you want, as ItemsAdded
2014-11-27 22:07:26.6176|WARN|thread: 1|LogHost|and friends will appear to 'miss' items
2014-11-27 22:07:26.9188|INFO|thread: 7|SSHKeyHelper|Found existing SSH key pair
2014-11-27 22:07:26.9298|INFO|thread:13|AsyncReaderWriterLock|Acquiring concurrent lock for operation 1: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:26.9298|INFO|thread:13|AsyncReaderWriterLock|Acquired concurrent lock for operation 1: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:27.0509|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.RepositoryView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.0569|INFO|thread:13|AsyncReaderWriterLock|Released concurrent lock for operation 1: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:27.1960|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.PublishToHostButton is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.2561|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.AheadBehindIndicator is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.4922|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.CommitForm is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.6643|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.NewCommitView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.7884|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.PublishToHostPopup is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:27.9185|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.PublishToHostTab is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:28.0766|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.GitHubLogin is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:28.2057|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.GitHubEnterpriseLogin is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:28.3007|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.BranchesPopup is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:28.5299|INFO|thread:13|AsyncReaderWriterLock|Acquiring concurrent lock for operation 2: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:28.5299|INFO|thread: 8|AsyncReaderWriterLock|Acquired concurrent lock for operation 2: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:28.5469|INFO|thread:13|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:28.5469|INFO|thread:13|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\WINDOWS\System32
2014-11-27 22:07:28.5469|INFO|thread:13|ProcessWrapper|Starting: Process - FileName: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\git.exe', Args: 'status --untracked-files=all --porcelain -z ', Working Directory: C:\Users\Jacob\Documents\GitHub\Miscellaneous\
2014-11-27 22:07:28.5469|INFO|thread: 7|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:28.5589|INFO|thread: 7|RepositoryConnection|Loaded '1' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:28.5959|INFO|thread:20|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:28.6090|INFO|thread:20|RepositoryConnection|Loaded '5' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:28.7981|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.Controls.CommitListItem is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:28.8761|INFO|thread:13|AsyncReaderWriterLock|Released concurrent lock for operation 2: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:28.9742|INFO|thread: 8|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:28.9742|INFO|thread: 8|RepositoryConnection|Loaded '5' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:29.2083|INFO|thread:18|SoftwareUpdateViewModel|Checking for new version
2014-11-27 22:07:29.2294|WARN|thread: 1|POCOObservableForProperty|GitHub.Views.WorkingDirectoryFileDiffView is a POCO type and won't send change notifications, WhenAny will only return a single value!
2014-11-27 22:07:29.2844|INFO|thread: 1|RepositoryViewModel|Created Shadow Backup for Repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous => ae9e1e9f6cded875c7b95e829b4bb44fa888c136 in 403ms
2014-11-27 22:07:29.4595|INFO|thread: 1|SyncButtonViewModel|Getting ahead/behind counts but skipping the fetch.
2014-11-27 22:07:29.4755|INFO|thread:13|RepositoryConnection|Detecting ahead/behind info for branch: master.
2014-11-27 22:07:29.5316|INFO|thread:13|RepositoryConnection|branch stats: ahead 1, behind 5
2014-11-27 22:07:29.5486|INFO|thread: 1|SyncButtonViewModel|Getting ahead/behind counts and running a full fetch.
2014-11-27 22:07:29.5646|INFO|thread:13|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:29.5646|INFO|thread:13|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\WINDOWS\System32
2014-11-27 22:07:29.5646|INFO|thread:13|ProcessWrapper|Starting: Process - FileName: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\git.exe', Args: 'fetch origin --prune ', Working Directory: C:\Users\Jacob\Documents\GitHub\Miscellaneous\
2014-11-27 22:07:32.3384|INFO|thread:13|RepositoryConnection|Detecting ahead/behind info for branch: master.
2014-11-27 22:07:32.3384|INFO|thread:13|RepositoryConnection|branch stats: ahead 1, behind 6
2014-11-27 22:07:36.7989|INFO|thread: 1|RepositoryHost|Log in from cache for login 'SubjectAlpha' to host 'https://api.github.com/' SUCCEEDED
2014-11-27 22:07:36.8099|INFO|thread: 1|SyncButtonViewModel|Starting sync for C:\Users\Jacob\Documents\GitHub\Miscellaneous - master
2014-11-27 22:07:36.8099|INFO|thread: 1|GitClient|Sync has latest unpublished commit SHA: '926a4a788af5b0d9064238f3cc6b001f9f63b721'
2014-11-27 22:07:36.8210|INFO|thread:20|AsyncReaderWriterLock|Acquiring exclusive lock for operation 3: 'SyncBranch' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:36.8210|INFO|thread: 8|AsyncReaderWriterLock|Acquired exclusive lock for operation 3: 'SyncBranch' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:36.8390|INFO|thread:20|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:36.8390|INFO|thread:20|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\WINDOWS\System32
2014-11-27 22:07:36.8390|INFO|thread:20|ProcessWrapper|Starting: Process - FileName: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\git.exe', Args: 'pull --progress --rebase --prune origin master ', Working Directory: C:\Users\Jacob\Documents\GitHub\Miscellaneous\
2014-11-27 22:07:37.5715|INFO|thread:18|AsyncReaderWriterLock|Released exclusive lock for operation 3: 'SyncBranch' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:37.6385|WARN|thread: 1|StandardUserErrors|Showing user error It appears that you are in the middle of a merge conflict. Open the Git Shell and resolve the conflicts in your working directory before attempting to sync again.
GitHub.IO.ProcessException: M	contact.txt
A	lua/autorun/join-dc-msg.lua
M	lua/autorun/physicsgun.lua
D	lua/autorun/plyjoin_dc.lua
U	lua/autorun/server/join-dc-msg.lua
U	lua/autorun/server/plyjoin_dc.lua
Pull is not possible because you have unmerged files.
Please, fix them up in the work tree, and then use 'git add/rm <file>'
as appropriate to mark resolution, or use 'git commit -a'.
   at System.Reactive.PlatformServices.ExceptionServicesImpl.Rethrow(Exception exception)
   at System.Reactive.ExceptionHelpers.ThrowIfNotNull(Exception exception)
   at System.Reactive.Subjects.AsyncSubject`1.GetResult()
   at GitHub.Helpers.GitClient.<>c__DisplayClass11c.<<SyncBranch>b__117>d__123.MoveNext()
2014-11-27 22:07:38.9440|INFO|thread: 1|SyncButtonViewModel|Completing sync for C:\Users\Jacob\Documents\GitHub\Miscellaneous - master
2014-11-27 22:07:38.9440|INFO|thread:23|AsyncReaderWriterLock|Acquiring concurrent lock for operation 4: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:38.9440|INFO|thread:23|AsyncReaderWriterLock|Acquired concurrent lock for operation 4: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:38.9610|INFO|thread:23|AsyncReaderWriterLock|Released concurrent lock for operation 4: 'LoadHeadForRepo' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:38.9890|INFO|thread:22|AsyncReaderWriterLock|Acquiring concurrent lock for operation 5: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:38.9890|INFO|thread:22|AsyncReaderWriterLock|Acquired concurrent lock for operation 5: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:38.9940|INFO|thread:22|GitEnvironment|Process set up with this SSH Agent info: 7064:/tmp/ssh-2WbcWYCaUg9C/agent.5972
2014-11-27 22:07:38.9940|INFO|thread:22|GitEnvironment|PATH is C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\cmd;C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin;C:\Users\Jacob\AppData\Local\Apps\2.0\DKC756Y4.PAP\G5B5JL1A.20P\gith..tion_317444273a93ac29_0002.0006_322e607d54d660d4;C:\Users\Jacob\AppData\Local\GitHub\git-media-amd64_0.2.2;C:\WINDOWS\Microsoft.NET\Framework\v4.0.30319;C:\WINDOWS\System32
2014-11-27 22:07:38.9940|INFO|thread:22|ProcessWrapper|Starting: Process - FileName: 'C:\Users\Jacob\AppData\Local\GitHub\PortableGit_ed44d00daa128db527396557813e7b68709ed0e2\bin\git.exe', Args: 'status --untracked-files=all --porcelain -z ', Working Directory: C:\Users\Jacob\Documents\GitHub\Miscellaneous\
2014-11-27 22:07:38.9940|INFO|thread: 8|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:39.0060|INFO|thread: 8|RepositoryConnection|Loaded '1' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:39.0550|INFO|thread: 7|GitClient|Loading commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous
2014-11-27 22:07:39.0550|INFO|thread: 7|RepositoryConnection|Loaded '5' commits for repo: C:\Users\Jacob\Documents\GitHub\Miscellaneous\.
2014-11-27 22:07:39.1311|INFO|thread: 8|AsyncReaderWriterLock|Released concurrent lock for operation 5: 'LoadFilesInWorkingDirectory' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:39.2382|INFO|thread: 1|SyncButtonViewModel|Getting ahead/behind counts but skipping the fetch.
2014-11-27 22:07:39.2432|INFO|thread:22|RepositoryConnection|Detecting ahead/behind info for branch: master.
2014-11-27 22:07:39.2432|INFO|thread:22|RepositoryConnection|branch stats: ahead 1, behind 6
2014-11-27 22:07:40.3905|INFO|thread:18|AsyncReaderWriterLock|Acquiring exclusive lock for operation 6: 'CreateCommit' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:40.3905|INFO|thread:18|AsyncReaderWriterLock|Acquired exclusive lock for operation 6: 'CreateCommit' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git
2014-11-27 22:07:40.3996|INFO|thread:18|ExclusiveRepositoryConnection|Creating Commit
2014-11-27 22:07:40.4146|INFO|thread:18|ExclusiveRepositoryConnection|Creating new commit with 4 file(s). Merge remote-tracking branch 'origin/master'

Conflicts:
	lua/autorun/plyjoin_dc.lua
	lua/autorun/server/join-dc-msg.lua
	lua/autorun/server/plyjoin_dc.lua

2014-11-27 22:07:40.4336|INFO|thread:18|AsyncReaderWriterLock|Released exclusive lock for operation 6: 'CreateCommit' on resource C:\Users\Jacob\Documents\GitHub\Miscellaneous\.git