digraph graphname {
Primer3;
Java;
RNAz;
HPCBIOS_Bioinfo;
MUMmer;
MrBayes;
libxml2;
expat;
FSL;
Mothur;
Perl;
ant;
PAML;
GLIMMER;
libxslt;
BamTools;
Boost;
Infernal;
BioPerl;
biodeps;
"ALLPATHS-LG";
BFAST;
hwloc;
tbb;
"FASTX-Toolkit";
gompi;
libreadline;
ScaLAPACK;
ViennaRNA;
BWA;
EMBOSS;
Trinity;
libpng;
ClustalW2;
numpy;
Velvet;
Bowtie2;
MEME;
SAMtools;
NEURON;
Oases;
GROMACS;
RAxML;
ncurses;
FFTW;
bzip2;
goolf;
SHRiMP;
libharu;
MetaVelvet;
libgtextutils;
SOAPdenovo;
"BLAST+";
GCC;
AMOS;
Cufflinks;
"HH-suite";
Pasha;
FASTA;
MCL;
CMake;
Eigen;
Biopython;
OpenBLAS;
zlib;
bam2fastq;
HMMER;
Python;
OpenMPI;
gzip;
mpiBLAST;
JUnit;
Primer3 -> goolf;
RNAz -> goolf;
HPCBIOS_Bioinfo -> "ALLPATHS-LG";
HPCBIOS_Bioinfo -> AMOS;
HPCBIOS_Bioinfo -> BFAST;
HPCBIOS_Bioinfo -> "BLAST+";
HPCBIOS_Bioinfo -> BWA;
HPCBIOS_Bioinfo -> BamTools;
HPCBIOS_Bioinfo -> BioPerl;
HPCBIOS_Bioinfo -> Biopython;
HPCBIOS_Bioinfo -> Bowtie2;
HPCBIOS_Bioinfo -> bam2fastq;
HPCBIOS_Bioinfo -> biodeps;
HPCBIOS_Bioinfo -> ClustalW2;
HPCBIOS_Bioinfo -> Cufflinks;
HPCBIOS_Bioinfo -> EMBOSS;
HPCBIOS_Bioinfo -> FASTA;
HPCBIOS_Bioinfo -> "FASTX-Toolkit";
HPCBIOS_Bioinfo -> FSL;
HPCBIOS_Bioinfo -> GLIMMER;
HPCBIOS_Bioinfo -> GROMACS;
HPCBIOS_Bioinfo -> "HH-suite";
HPCBIOS_Bioinfo -> HMMER;
HPCBIOS_Bioinfo -> Infernal;
HPCBIOS_Bioinfo -> libgtextutils;
HPCBIOS_Bioinfo -> libharu;
HPCBIOS_Bioinfo -> MCL;
HPCBIOS_Bioinfo -> MEME;
HPCBIOS_Bioinfo -> MUMmer;
HPCBIOS_Bioinfo -> MetaVelvet;
HPCBIOS_Bioinfo -> Mothur;
HPCBIOS_Bioinfo -> MrBayes;
HPCBIOS_Bioinfo -> mpiBLAST;
HPCBIOS_Bioinfo -> NEURON;
HPCBIOS_Bioinfo -> Oases;
HPCBIOS_Bioinfo -> PAML;
HPCBIOS_Bioinfo -> Pasha;
HPCBIOS_Bioinfo -> Primer3;
HPCBIOS_Bioinfo -> RAxML;
HPCBIOS_Bioinfo -> RNAz;
HPCBIOS_Bioinfo -> SAMtools;
HPCBIOS_Bioinfo -> SHRiMP;
HPCBIOS_Bioinfo -> SOAPdenovo;
HPCBIOS_Bioinfo -> Trinity;
HPCBIOS_Bioinfo -> Velvet;
HPCBIOS_Bioinfo -> ViennaRNA;
HPCBIOS_Bioinfo -> goolf;
MUMmer -> goolf;
MrBayes -> libreadline;
MrBayes -> ncurses;
MrBayes -> goolf;
libxml2 -> zlib;
libxml2 -> goolf;
expat -> goolf;
FSL -> goolf;
Mothur -> libreadline;
Mothur -> ncurses;
Mothur -> bzip2;
Mothur -> gzip;
Mothur -> goolf;
Perl -> goolf;
ant -> Java;
ant -> JUnit  [color=blue, style=dotted, arrowhead=diamond];
PAML -> goolf;
GLIMMER -> goolf;
libxslt -> zlib;
libxslt -> libxml2;
libxslt -> goolf;
BamTools -> CMake  [color=blue, style=dotted, arrowhead=diamond];
BamTools -> goolf;
Boost -> bzip2;
Boost -> Python;
Boost -> goolf;
Infernal -> goolf;
BioPerl -> Perl;
BioPerl -> goolf;
biodeps -> bzip2;
biodeps -> zlib;
biodeps -> libreadline;
biodeps -> ncurses;
biodeps -> goolf;
"ALLPATHS-LG" -> goolf;
BFAST -> bzip2;
BFAST -> goolf;
hwloc -> GCC;
"FASTX-Toolkit" -> libgtextutils;
"FASTX-Toolkit" -> goolf;
gompi -> GCC;
gompi -> OpenMPI;
libreadline -> ncurses;
libreadline -> goolf;
ScaLAPACK -> OpenBLAS;
ScaLAPACK -> gompi;
ViennaRNA -> goolf;
BWA -> goolf;
EMBOSS -> libharu;
EMBOSS -> Java;
EMBOSS -> goolf;
Trinity -> Java;
Trinity -> ant;
Trinity -> ncurses;
Trinity -> zlib;
Trinity -> goolf;
libpng -> zlib;
libpng -> goolf;
ClustalW2 -> goolf;
numpy -> Python;
numpy -> goolf;
Velvet -> goolf;
Bowtie2 -> goolf;
MEME -> libxml2;
MEME -> libxslt;
MEME -> zlib;
MEME -> goolf;
SAMtools -> ncurses;
SAMtools -> zlib;
SAMtools -> goolf;
NEURON -> libreadline;
NEURON -> ncurses;
NEURON -> Python;
NEURON -> goolf;
Oases -> goolf;
GROMACS -> CMake  [color=blue, style=dotted, arrowhead=diamond];
GROMACS -> goolf;
RAxML -> goolf;
ncurses -> goolf;
FFTW -> gompi;
bzip2 -> goolf;
goolf -> GCC;
goolf -> OpenMPI;
goolf -> OpenBLAS;
goolf -> FFTW;
goolf -> ScaLAPACK;
SHRiMP -> goolf;
libharu -> libpng;
libharu -> CMake  [color=blue, style=dotted, arrowhead=diamond];
libharu -> goolf;
MetaVelvet -> Velvet;
MetaVelvet -> goolf;
libgtextutils -> goolf;
SOAPdenovo -> goolf;
"BLAST+" -> Boost;
"BLAST+" -> goolf;
AMOS -> expat;
AMOS -> MUMmer;
AMOS -> goolf;
Cufflinks -> Boost;
Cufflinks -> SAMtools;
Cufflinks -> Eigen;
Cufflinks -> zlib;
Cufflinks -> goolf;
"HH-suite" -> goolf;
Pasha -> tbb;
Pasha -> goolf;
FASTA -> goolf;
MCL -> goolf;
CMake -> ncurses;
CMake -> goolf;
Eigen -> goolf;
Biopython -> Python;
Biopython -> numpy;
Biopython -> goolf;
OpenBLAS -> gompi;
zlib -> goolf;
bam2fastq -> zlib;
bam2fastq -> goolf;
HMMER -> goolf;
Python -> bzip2;
Python -> zlib;
Python -> libreadline;
Python -> ncurses;
Python -> goolf;
OpenMPI -> hwloc;
OpenMPI -> GCC;
gzip -> goolf;
mpiBLAST -> goolf;
JUnit -> Java;
}