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GATK Galaxy Functional Tests

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Apr 8th, 2013
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  1. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_variant_combine 2>&1" | grep -A 3 "^Ran"
  2. Ran 1 test in 17.917s
  3.  
  4. OK
  5. functional_tests.py INFO 2013-04-08 13:07:24,271 Shutting down
  6. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_analyze_covariates 2>&1" | grep -A 3 "^Ran"
  7. Ran 1 test in 14.112s
  8.  
  9. OK
  10. functional_tests.py INFO 2013-04-08 13:08:40,025 Shutting down
  11. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_count_covariates 2>&1" | grep -A 3 "^Ran"
  12. Ran 1 test in 22.317s
  13.  
  14. OK
  15. functional_tests.py INFO 2013-04-08 13:09:29,087 Shutting down
  16. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_depth_of_coverage 2>&1" | grep -A 3 "^Ran"
  17. Ran 1 test in 24.546s
  18.  
  19. OK
  20. functional_tests.py INFO 2013-04-08 13:11:07,099 Shutting down
  21. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_indel_realigner 2>&1" | grep -A 3 "^Ran"
  22. Ran 1 test in 31.845s
  23.  
  24. OK
  25. functional_tests.py INFO 2013-04-08 13:11:56,882 Shutting down
  26. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_print_reads 2>&1" | grep -A 3 "^Ran"
  27. Ran 1 test in 17.875s
  28.  
  29. OK
  30. functional_tests.py INFO 2013-04-08 13:12:36,907 Shutting down
  31. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_realigner_target_creator 2>&1" | grep -A 3 "^Ran"
  32. Ran 1 test in 25.420s
  33.  
  34. OK
  35. functional_tests.py INFO 2013-04-08 13:13:35,235 Shutting down
  36. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_table_recalibration 2>&1" | grep -A 3 "^Ran"
  37. Ran 1 test in 24.293s
  38.  
  39. OK
  40. functional_tests.py INFO 2013-04-08 13:14:33,188 Shutting down
  41. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_unified_genotyper 2>&1" | grep -A 3 "^Ran"
  42. Ran 1 test in 30.053s
  43.  
  44. OK
  45. functional_tests.py INFO 2013-04-08 13:15:32,177 Shutting down
  46. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_variant_annotator 2>&1" | grep -A 3 "^Ran"
  47. Ran 1 test in 27.274s
  48.  
  49. OK
  50. functional_tests.py INFO 2013-04-08 13:16:42,737 Shutting down
  51. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_variant_eval 2>&1" | grep -A 3 "^Ran"
  52. Ran 1 test in 20.359s
  53.  
  54. OK
  55. functional_tests.py INFO 2013-04-08 13:17:30,022 Shutting down
  56. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_variant_filtration 2>&1" | grep -A 3 "^Ran"
  57. Ran 1 test in 19.880s
  58.  
  59. OK
  60. functional_tests.py INFO 2013-04-08 13:18:21,019 Shutting down
  61. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_variant_select 2>&1" | grep -A 3 "^Ran"
  62. Ran 1 test in 19.641s
  63.  
  64. OK
  65. functional_tests.py INFO 2013-04-08 13:19:12,139 Shutting down
  66. jlaptop13  galaxy-central [tool_macros_2]bash -c  "./run_functional_tests.sh -id gatk_validate_variants 2>&1" | grep -A 3 "^Ran"
  67. Ran 1 test in 23.236s
  68.  
  69. OK
  70. functional_tests.py INFO 2013-04-08 13:19:58,359 Shutting down
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