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Jul 29th, 2015
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  1. for i in ../CP011360-split/chunk-*.fasta; do
  2. echo $i
  3. blastp \
  4. -query $i \
  5. -db md5nr.clean \
  6. -outfmt 6 \
  7. -out $(basename $i).md5.tab \
  8. -max_target_seqs 10 \
  9. -num_threads 24 && touch $(basename $i).complete
  10. done
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